CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cucsa.162820
(
Cucumis sativus
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
Cucsa.162820
T355599_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY40
M02548_2.00
Arabidopsis thaliana
NRGTCAWN
NWTGACYN
PBM
Weirauch et al.(2014)
pTH8398
0.851
0.690
WRKY40
M07379_2.00
Arabidopsis thaliana
NNNAAAGTCAAVR
YBTTGACTTTNNN
Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a
0.851
0.690
WRKY40
M07380_2.00
Arabidopsis thaliana
NNVAAAGTCAAVRNH
DNYBTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY40_col
0.851
0.690
WRKY40
M08180_2.00
Arabidopsis thaliana
NNAGTCAANN
NNTTGACTNN
ChIP-seq
Mathelier et al.(2014)
MA1085.2
0.851
0.690
WRKY60
M02551_2.00
Arabidopsis thaliana
NYGGTCAAMNN
NNKTTGACCRN
PBM
Weirauch et al.(2014)
pTH7379
0.851
0.707
WRKY18
M02560_2.00
Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN
PBM
Weirauch et al.(2014)
pTH7360
0.842
0.690
WRKY18
M00900_2.00
Arabidopsis thaliana
NVGTCNN
NNGACBN
PBM
Franco-Zorrilla et al.(2014)
WRKY18
0.842
0.690
WRKY18
M07416_2.00
Arabidopsis thaliana
NNHRGTCAASR
YSTTGACYDNN
Dap-seq
OMalley et al.(2016)
WRKY18_col_a
0.842
0.690
WRKY18
M07417_2.00
Arabidopsis thaliana
NNNHWAGTCAANR
YNTTGACTWDNNN
Dap-seq
OMalley et al.(2016)
WRKY18_colamp_a
0.842
0.690
WRKY18
M11465_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY18_Q2
0.842
0.690
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.162820.1
WRKY
90
147
KDGYKWRKYGQKITKDNQSPRAYFKCSSPGCPVKKKVQRSLENKSMVIVTYDGHHNHN
Links
Other
WRKY
family TFs
Other
Cucumis sativus
TFs
291 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29703.m001536
Ricinus communis
29703.m001536
N
0.000
AMTR_s00025p00060270
Amborella trichopoda
AMTR_s00025p00060270
N
0.000
Aquca_026_00063
Aquilegia coerulea
Aquca_026_00063
N
0.000
Bo9g006180
Brassica oleracea
Bo9g006180
N
0.000
Bostr.2983s0143
Boechera stricta
Bostr.2983s0143
N
0.000
Bra036228
Brassica rapa
Bra036228
N
0.000
Cagra.2552s0028
Capsella grandiflora
Cagra.2552s0028
N
0.000
Carubv10003638m.g
Capsella rubella
Carubv10003638m.g
N
0.000
cassava29542.valid.m1
Manihot esculenta
cassava29542.valid.m1
N
0.000
Ca_25867
Cicer arietinum
Ca_25867
N
0.000
Ciclev10019732m.g
Citrus clementina
Ciclev10019732m.g
N
0.000
Cla005647
Citrullus lanatus
Cla005647
N
0.000
Cucsa.033690
Cucumis sativus
Cucsa.033690
N
0.000
Eucgr.A01358
Eucalyptus grandis
Eucgr.A01358
N
0.000
fgenesh2_kg.6__3397__AT4G02990.1
Arabidopsis lyrata
fgenesh2_kg.6__3397__AT4G02990.1
N
0.000
GLYMA02G38800
Glycine max
GLYMA02G38800
N
0.000
Gorai.004G084100
Gossypium raimondii
Gorai.004G084100
N
0.000
Lus10014877.g
Linum usitatissimum
Lus10014877.g
N
0.000
mgf007983m
Mimulus guttatus
mgf007983m
N
0.000
mgf009605m
Mimulus guttatus
mgf009605m
N
0.000
MTERF4
Arabidopsis thaliana
AT4G02990
N
0.000
MTR_5g068860
Medicago truncatula
MTR_5g068860
N
0.000
orange1.1g010066m.g
Citrus sinensis
orange1.1g010066m.g
N
0.000
PGSC0003DMG400002856
Solanum tuberosum
PGSC0003DMG400002856
N
0.000
PK15839.1
Cannabis sativa
PK15839.1
N
0.000
Pm019894
Prunus mume
Pm019894
N
0.000
POPTR_0014s13360
Populus trichocarpa
POPTR_0014s13360
N
0.000
PRUPE_ppa004198mg
Prunus persica
PRUPE_ppa004198mg
N
0.000
SapurV1A.0053s0470
Salix purpurea
SapurV1A.0053s0470
N
0.000
Solyc04g005630.2
Solanum lycopersicum
Solyc04g005630.2
N
0.000
TCM_004475
Theobroma cacao
TCM_004475
N
0.000
Thhalv10028570m.g
Eutrema salsugineum
Thhalv10028570m.g
N
0.000
VIT_07s0104g00720
Vitis vinifera
VIT_07s0104g00720
N
0.000