Cucsa.162820 (Cucumis sativus)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Cucsa.162820 T355599_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY40
M02548_2.00
Arabidopsis thaliana
NRGTCAWN

NWTGACYN
PBM
Weirauch et al.(2014)
pTH8398
0.851 0.690
WRKY40
M07379_2.00
Arabidopsis thaliana
NNNAAAGTCAAVR

YBTTGACTTTNNN
Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a
0.851 0.690
WRKY40
M07380_2.00
Arabidopsis thaliana
NNVAAAGTCAAVRNH

DNYBTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY40_col
0.851 0.690
WRKY40
M08180_2.00
Arabidopsis thaliana
NNAGTCAANN

NNTTGACTNN
ChIP-seq
Mathelier et al.(2014)
MA1085.2
0.851 0.690
WRKY60
M02551_2.00
Arabidopsis thaliana
NYGGTCAAMNN

NNKTTGACCRN
PBM
Weirauch et al.(2014)
pTH7379
0.851 0.707
WRKY18
M02560_2.00
Arabidopsis thaliana
NNRGTCAANN

NNTTGACYNN
PBM
Weirauch et al.(2014)
pTH7360
0.842 0.690
WRKY18
M00900_2.00
Arabidopsis thaliana
NVGTCNN

NNGACBN
PBM
Franco-Zorrilla et al.(2014)
WRKY18
0.842 0.690
WRKY18
M07416_2.00
Arabidopsis thaliana
NNHRGTCAASR

YSTTGACYDNN
Dap-seq
OMalley et al.(2016)
WRKY18_col_a
0.842 0.690
WRKY18
M07417_2.00
Arabidopsis thaliana
NNNHWAGTCAANR

YNTTGACTWDNNN
Dap-seq
OMalley et al.(2016)
WRKY18_colamp_a
0.842 0.690
WRKY18
M11465_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY18_Q2
0.842 0.690
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.162820.1 WRKY 90 147

Links

Other WRKY family TFs
Other Cucumis sativus TFs

291 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29703.m001536 Ricinus communis 29703.m001536 N 0.000
AMTR_s00025p00060270 Amborella trichopoda AMTR_s00025p00060270 N 0.000
Aquca_026_00063 Aquilegia coerulea Aquca_026_00063 N 0.000
Bo9g006180 Brassica oleracea Bo9g006180 N 0.000
Bostr.2983s0143 Boechera stricta Bostr.2983s0143 N 0.000
Bra036228 Brassica rapa Bra036228 N 0.000
Cagra.2552s0028 Capsella grandiflora Cagra.2552s0028 N 0.000
Carubv10003638m.g Capsella rubella Carubv10003638m.g N 0.000
cassava29542.valid.m1 Manihot esculenta cassava29542.valid.m1 N 0.000
Ca_25867 Cicer arietinum Ca_25867 N 0.000
Ciclev10019732m.g Citrus clementina Ciclev10019732m.g N 0.000
Cla005647 Citrullus lanatus Cla005647 N 0.000
Cucsa.033690 Cucumis sativus Cucsa.033690 N 0.000
Eucgr.A01358 Eucalyptus grandis Eucgr.A01358 N 0.000
fgenesh2_kg.6__3397__AT4G02990.1 Arabidopsis lyrata fgenesh2_kg.6__3397__AT4G02990.1 N 0.000
GLYMA02G38800 Glycine max GLYMA02G38800 N 0.000
Gorai.004G084100 Gossypium raimondii Gorai.004G084100 N 0.000
Lus10014877.g Linum usitatissimum Lus10014877.g N 0.000
mgf007983m Mimulus guttatus mgf007983m N 0.000
mgf009605m Mimulus guttatus mgf009605m N 0.000
MTERF4 Arabidopsis thaliana AT4G02990 N 0.000
MTR_5g068860 Medicago truncatula MTR_5g068860 N 0.000
orange1.1g010066m.g Citrus sinensis orange1.1g010066m.g N 0.000
PGSC0003DMG400002856 Solanum tuberosum PGSC0003DMG400002856 N 0.000
PK15839.1 Cannabis sativa PK15839.1 N 0.000
Pm019894 Prunus mume Pm019894 N 0.000
POPTR_0014s13360 Populus trichocarpa POPTR_0014s13360 N 0.000
PRUPE_ppa004198mg Prunus persica PRUPE_ppa004198mg N 0.000
SapurV1A.0053s0470 Salix purpurea SapurV1A.0053s0470 N 0.000
Solyc04g005630.2 Solanum lycopersicum Solyc04g005630.2 N 0.000
TCM_004475 Theobroma cacao TCM_004475 N 0.000
Thhalv10028570m.g Eutrema salsugineum Thhalv10028570m.g N 0.000
VIT_07s0104g00720 Vitis vinifera VIT_07s0104g00720 N 0.000