CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.chr_7_#_290
(
Ostreococcus RCC809
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
fgenesh1_pg.chr_7_#_290
T355656_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
0700010421
M02569_2.00
Ostreococcus tauri
NHRGTCAACNNNN
NNNNGTTGACYDN
PBM
Weirauch et al.(2014)
pTH9449
0.818
0.596
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.chr_7_#_290
WRKY
40
100
EDGFRWRKYGNKMLSGQRHPRGYYKCTTVPKTAKFHKQVERTSSGVGAAEERYLITYYGDR
Links
Other
WRKY
family TFs
Other
Ostreococcus RCC809
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
0700010421
Ostreococcus tauri
0700010421
D
0.818