CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgeneshDP_pm.C_scaffold_39000024
(
Dictyostelium purpureum
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
fgeneshDP_pm.C_scaffold_39000024
T355663_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN
NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.827
0.582
WRKY45
M00899_2.00
Arabidopsis thaliana
NNRGTCAAMGN
NCKTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY45
0.812
0.582
WRKY45
M07397_2.00
Arabidopsis thaliana
NAAAAGTCAAMD
HKTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY45_col_a
0.812
0.582
WRKY45
M07398_2.00
Arabidopsis thaliana
MAAAGTCAAMV
BKTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY45_colamp_a
0.812
0.582
WRKY57
M02547_2.00
Arabidopsis thaliana
NNRGTCAAHN
NDTTGACYNN
PBM
Weirauch et al.(2014)
pTH7917
0.810
0.545
WRKY71
M07374_2.00
Arabidopsis thaliana
HAAAGTCAAMN
NKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY71_col_a
0.810
0.545
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshDP_pm.C_scaffold_39000024
WRKY
60
114
DDGFSWRKYGQKAVKGSIFPKSYFKCAEPSCPVKKQVIQQDLKFINTYSGKHNHD
Links
Other
WRKY
family TFs
Other
Dictyostelium purpureum
TFs
267 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy