CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_005_00231
(
Aquilegia coerulea
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
Aquca_005_00231
T355761_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY20
M07414_2.00
Arabidopsis thaliana
HHHRGTCAAMGNH
DNCKTTGACYDDD
Dap-seq
OMalley et al.(2016)
WRKY20_col_a
0.879
0.904
WRKY3
M07381_2.00
Arabidopsis thaliana
MAWAGTCAAMR
YKTTGACTWTK
Dap-seq
OMalley et al.(2016)
WRKY3_col_a
0.863
0.817
Q40090_IPOBA
M11466_2.00
Ipomoea batatas
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SPF1_Q2
0.863
0.843
WRKY33
M02554_2.00
Arabidopsis thaliana
NNRGTCHDNN
NNHDGACYNN
PBM
Weirauch et al.(2014)
pTH8183
0.858
0.843
WRKY33
M07391_2.00
Arabidopsis thaliana
HWWAGTCAAMD
HKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY33_col_a
0.858
0.843
PK05432.1
M01324_2.00
Cannabis sativa
NNRGTCARH
DYTGACYNN
PBM
Lambert et al.(2019)
pTH11342
0.858
0.852
WRKY26
M07418_2.00
Arabidopsis thaliana
MWAAGTCAACGNH
DNCGTTGACTWWK
Dap-seq
OMalley et al.(2016)
WRKY26_col_a
0.856
0.774
WRKY26
M07419_2.00
Arabidopsis thaliana
HMWAGTCAAMR
YKTTGACTWKD
Dap-seq
OMalley et al.(2016)
WRKY26_colamp_a
0.856
0.774
WRKY2
M02567_2.00
Arabidopsis thaliana
BRGTCAAM
KTTGACYV
PBM
Weirauch et al.(2014)
pTH8832
0.854
0.852
WRKY25
M02552_2.00
Arabidopsis thaliana
YRGTCAAM
KTTGACYR
PBM
Weirauch et al.(2014)
pTH8810
0.842
0.713
WRKY25
M07387_2.00
Arabidopsis thaliana
HWWRGTCAAMR
YKTTGACYWWD
Dap-seq
OMalley et al.(2016)
WRKY25_col_a
0.842
0.713
WRKY25
M07388_2.00
Arabidopsis thaliana
NNNHWRGTCAACRNH
DNYGTTGACYWDNNN
Dap-seq
OMalley et al.(2016)
WRKY25_colamp_a
0.842
0.713
ZAP1
M02726_2.00
Arabidopsis thaliana
DRCKCGGTCAA
TTGACCGMGYH
SELEX
Mathelier et al.(2014)
MA0589.1
0.842
0.739
ZAP1
M11463_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ZAP1_01
0.842
0.739
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_005_00231.1
WRKY
274
330
EDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCQVKKQLERSHDGQITEIIYKGKHDHP
Aquca_005_00231.1
WRKY
453
510
DDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD
Aquca_005_00231.2
WRKY
229
285
EDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCQVKKQLERSHDGQITEIIYKGKHDHP
Aquca_005_00231.2
WRKY
408
465
DDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD
Aquca_005_00231.3
WRKY
229
285
EDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCQVKKQLERSHDGQITEIIYKGKHDHP
Aquca_005_00231.3
WRKY
408
465
DDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD
Links
Other
WRKY
family TFs
Other
Aquilegia coerulea
TFs
788 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy