Bostr.2902s0247 (Boechera stricta)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Bostr.2902s0247 T355839_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY6
M07377_2.00
Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG

CGTTGACYNDNDHNDNNNH
Dap-seq
OMalley et al.(2016)
WRKY6_col_a
0.875 0.864
WRKY6
M07378_2.00
Arabidopsis thaliana
NNHNWRGTCAACKNH

DNMGTTGACYWNDNN
Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a
0.875 0.864
WRKY31
M07408_2.00
Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG

CGTTGACYHNNNNNDNNNN
Dap-seq
OMalley et al.(2016)
WRKY31_col_a
0.873 0.864
WRKY31
M07409_2.00
Arabidopsis thaliana
NHWRGTCAACKNH

DNMGTTGACYWDN
Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a
0.873 0.864
WRKY42
M07404_2.00
Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN

NNDNNHNNNNHGTTGACYWHN
Dap-seq
OMalley et al.(2016)
WRKY42_col_a
0.871 0.847
WRKY42
M07405_2.00
Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD

HHNDNMGTTGACYWNNNHND
Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a
0.871 0.847
WRKY47
M00732_2.00
Arabidopsis thaliana
NNRGTCAACKN

NMGTTGACYNN
PBM
Chang et al.(2013)
pTH7913
0.869 0.847
WRKY47
M07402_2.00
Arabidopsis thaliana
WRGTCAAMGNHVDK

MHBDNCKTTGACYW
Dap-seq
OMalley et al.(2016)
WRKY47_col_a
0.869 0.847
WRKY47
M07403_2.00
Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN

NNNNDNMGTTGACYWDNNN
Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a
0.869 0.847
WRKY60
M02551_2.00
Arabidopsis thaliana
NYGGTCAAMNN

NNKTTGACCRN
PBM
Weirauch et al.(2014)
pTH7379
0.820 0.627
WRKY40
M02548_2.00
Arabidopsis thaliana
NRGTCAWN

NWTGACYN
PBM
Weirauch et al.(2014)
pTH8398
0.819 0.593
WRKY40
M07379_2.00
Arabidopsis thaliana
NNNAAAGTCAAVR

YBTTGACTTTNNN
Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a
0.819 0.593
WRKY40
M07380_2.00
Arabidopsis thaliana
NNVAAAGTCAAVRNH

DNYBTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY40_col
0.819 0.593
WRKY40
M08180_2.00
Arabidopsis thaliana
NNAGTCAANN

NNTTGACTNN
ChIP-seq
Mathelier et al.(2014)
MA1085.2
0.819 0.593
WRKY18
M02560_2.00
Arabidopsis thaliana
NNRGTCAANN

NNTTGACYNN
PBM
Weirauch et al.(2014)
pTH7360
0.816 0.644
WRKY18
M00900_2.00
Arabidopsis thaliana
NVGTCNN

NNGACBN
PBM
Franco-Zorrilla et al.(2014)
WRKY18
0.816 0.644
WRKY18
M07416_2.00
Arabidopsis thaliana
NNHRGTCAASR

YSTTGACYDNN
Dap-seq
OMalley et al.(2016)
WRKY18_col_a
0.816 0.644
WRKY18
M07417_2.00
Arabidopsis thaliana
NNNHWAGTCAANR

YNTTGACTWDNNN
Dap-seq
OMalley et al.(2016)
WRKY18_colamp_a
0.816 0.644
WRKY18
M11465_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY18_Q2
0.816 0.644
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.2902s0247.1.p WRKY 236 294

Links

Other WRKY family TFs
Other Boechera stricta TFs

780 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TELCIR_13776 Teladorsagia circumcincta TELCIR_13776 N 0.000
EEL_0000436501 Elaeophora elaphi EEL_0000436501 N 0.000
DICVIV_09521 Dictyocaulus viviparus DICVIV_09521 N 0.000
D918_05751 Trichuris suis D918_05751 N 0.000
CGOC_0000560601 Cylicostephanus goldi CGOC_0000560601 N 0.000
BXY_0681200 Bursaphelenchus xylophilus BXY_0681200 N 0.000
BTMF_0000819101 Brugia timori BTMF_0000819101 N 0.000
augustus_masked-nMf.1.1.scaf00776-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00776-processed-gene-0.0 N 0.000
ASIM_0001023101 Anisakis simplex ASIM_0001023101 N 0.000
ANCDUO_01800 Ancylostoma duodenale ANCDUO_01800 N 0.000
ANCCEY_04498 Ancylostoma ceylanicum ANCCEY_04498 N 0.000
ANCCAN_02501 Ancylostoma caninum ANCCAN_02501 N 0.000
ALUE_0000523001 Ascaris lumbricoides ALUE_0000523001 N 0.000
MDOA007303 Musca domestica MDOA007303 N 0.000
Hba_16068 Heterorhabditis bacteriophora Hba_16068 N 0.000
HPBE_0001925501 Heligmosomoides bakeri HPBE_0001925501 N 0.000
TCNE_0000027001 Toxocara canis TCNE_0000027001 N 0.000
TCLT_0000816701 Thelazia callipaeda TCLT_0000816701 N 0.000
SVE_1689300 Strongyloides venezuelensis SVE_1689300 N 0.000
scaffold58-EXSNAP2012.11 Pristionchus exspectatus scaffold58-EXSNAP2012.11 N 0.000
PEQ_0000886501 Parascaris equorum PEQ_0000886501 N 0.000
OFLC_0001322801 Onchocerca flexuosa OFLC_0001322801 N 0.000
nOo.2.0.1.g07994 Onchocerca ochengi nOo.2.0.1.g07994 N 0.000
nOo.2.0.1.g06917 Onchocerca ochengi nOo.2.0.1.g06917 N 0.000
nLs.2.1.2.g02280 Litomosoides sigmodontis nLs.2.1.2.g02280 N 0.000
nDi.2.2.2.g01975 Dirofilaria immitis nDi.2.2.2.g01975 N 0.000
nAv.1.0.1.g03640 Acanthocheilonema viteae nAv.1.0.1.g03640 N 0.000
L898_g11712 Steinernema monticolum L898_g11712 N 0.000
L893_g14196 Steinernema glaseri L893_g14196 N 0.000
BGLB003107 Biomphalaria glabrata BGLB003107 N 0.000
AQUA008305 Anopheles quadriannulatus AQUA008305 N 0.000
AMEM006409 Anopheles merus AMEM006409 N 0.000
CPIJ018552 Culex quinquefasciatus CPIJ018552 N 0.000
CPIJ006385 Culex quinquefasciatus CPIJ006385 N 0.000
CJA40030 Caenorhabditis japonica CJA40030 N 0.000
CJA30884 Caenorhabditis japonica CJA30884 N 0.000
CGI_10012805 Crassostrea gigas CGI_10012805 N 0.000
CBN28537 Caenorhabditis brenneri CBN28537 N 0.000
CBN28364 Caenorhabditis brenneri CBN28364 N 0.000
CBG25174 Caenorhabditis briggsae CBG25174 N 0.000
CapteG215623 Capitella teleta CapteG215623 N 0.000
Bm12962 Brugia malayi Bm12962 N 0.000
AAEL003558 Aedes aegypti AAEL003558 N 0.000
WUBG_04923 Wuchereria bancrofti WUBG_04923 N 0.000
CpipJ_CPIJ018552 Culex pipiens CpipJ_CPIJ018552 N 0.000
EFV52452 Trichinella spiralis EFV52452 N 0.000
GM26798 Drosophila sechellia FBgn0181651 N 0.000
AMEC001472 Anopheles melas AMEC001472 N 0.000
AMAM012119 Anopheles maculatus AMAM012119 N 0.000
ACOM027781 Anopheles coluzzii ACOM027781 N 0.000
ACHR008953 Anopheles christyi ACHR008953 N 0.000
AATE005200 Anopheles atroparvus AATE005200 N 0.000
AARA001118 Anopheles arabiensis AARA001118 N 0.000
LCUP009926 Lucilia cuprina LCUP009926 N 0.000
WBGene00237282 Onchocerca volvulus WBGene00237282 N 0.000
RPRC014602 Rhodnius prolixus RPRC014602 N 0.000
PPA09748 Pristionchus pacificus PPA09748 N 0.000
MESCA003372 Megaselia scalaris MESCA003372 N 0.000
LOAG_18302 Loa loa LOAG_18302 N 0.000
HelroG184094 Helobdella robusta HelroG184094 N 0.000
CpipJ_CPIJ006385 Culex pipiens CpipJ_CPIJ006385 N 0.000