Bostr.4825s0004 (Boechera stricta)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Bostr.4825s0004 T355844_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY47
M00732_2.00
Arabidopsis thaliana
NNRGTCAACKN

NMGTTGACYNN
PBM
Chang et al.(2013)
pTH7913
0.907 1.000
WRKY47
M07402_2.00
Arabidopsis thaliana
WRGTCAAMGNHVDK

MHBDNCKTTGACYW
Dap-seq
OMalley et al.(2016)
WRKY47_col_a
0.907 1.000
WRKY47
M07403_2.00
Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN

NNNNDNMGTTGACYWDNNN
Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a
0.907 1.000
WRKY42
M07404_2.00
Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN

NNDNNHNNNNHGTTGACYWHN
Dap-seq
OMalley et al.(2016)
WRKY42_col_a
0.901 0.949
WRKY42
M07405_2.00
Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD

HHNDNMGTTGACYWNNNHND
Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a
0.901 0.949
WRKY6
M07377_2.00
Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG

CGTTGACYNDNDHNDNNNH
Dap-seq
OMalley et al.(2016)
WRKY6_col_a
0.892 0.915
WRKY6
M07378_2.00
Arabidopsis thaliana
NNHNWRGTCAACKNH

DNMGTTGACYWNDNN
Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a
0.892 0.915
WRKY31
M07408_2.00
Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG

CGTTGACYHNNNNNDNNNN
Dap-seq
OMalley et al.(2016)
WRKY31_col_a
0.887 0.915
WRKY31
M07409_2.00
Arabidopsis thaliana
NHWRGTCAACKNH

DNMGTTGACYWDN
Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a
0.887 0.915
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.4825s0004.1.p WRKY 239 297
Bostr.4825s0004.2.p WRKY 215 273

Links

Other WRKY family TFs
Other Boechera stricta TFs

620 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Tal_R010066 Tyto alba Tal_R010066 N 0.000
Prdm10 Rattus norvegicus ENSRNOG00000007853 N 0.000
PRDM10 Pteropus vampyrus ENSPVAG00000012764 N 0.000
ENSPTRG00000004477 Pan troglodytes ENSPTRG00000004477 N 0.000
ENSPSIG00000009207 Pelodiscus sinensis ENSPSIG00000009207 N 0.000
ENSPPYG00000004061 Pongo abelii ENSPPYG00000004061 N 0.000
ENSPANG00000017470 Papio anubis ENSPANG00000017470 N 0.000
PRDM10 Otolemur garnettii ENSOGAG00000010723 N 0.000
ENSOARG00000014507 Ovis aries ENSOARG00000014507 N 0.000
ENSSHAG00000004503 Sarcophilus harrisii ENSSHAG00000004503 N 0.000
PRDM10 Sus scrofa ENSSSCG00000015243 N 0.000
PRDM10 Taeniopygia guttata ENSTGUG00000000530 N 0.000
Pvit_19202 Pogona vitticeps Pvit_19202 N 0.000
Ogr16136 Ophisaurus gracilis Ogr16136 N 0.000
Gfo_R003002 Geospiza fortis Gfo_R003002 N 0.000
Cmyd_10005399 Chelonia mydas Cmyd_10005399 N 0.000
Afo_R001308 Aptenodytes forsteri Afo_R001308 N 0.000
Aan_R007210 Calypte anna Aan_R007210 N 0.000
PRDM10 Tursiops truncatus ENSTTRG00000009189 N 0.000
ENSTSYG00000000544 Tarsius syrichta ENSTSYG00000000544 N 0.000
ENSOANG00000000577 Ornithorhynchus anatinus ENSOANG00000000577 N 0.000
ENSNLEG00000007488 Nomascus leucogenys ENSNLEG00000007488 N 0.000
ENSMPUG00000008711 Mustela putorius furo ENSMPUG00000008711 N 0.000
PRDM10 Dasypus novemcinctus ENSDNOG00000001366 N 0.000
ENSCSAG00000002202 Chlorocebus sabaeus ENSCSAG00000002202 N 0.000
PRDM10 Callithrix jacchus ENSCJAG00000009235 N 0.000
PRDM10 Choloepus hoffmanni ENSCHOG00000002494 N 0.000
PRDM10 Canis familiaris ENSCAFG00000010164 N 0.000
PRDM10 Bos taurus ENSBTAG00000019001 N 0.000
ENSAPLG00000004858 Anas platyrhynchos ENSAPLG00000004858 N 0.000
ENSAMEG00000002425 Ailuropoda melanoleuca ENSAMEG00000002425 N 0.000
PRDM10 Equus caballus ENSECAG00000011499 N 0.000
PRDM10 Erinaceus europaeus ENSEEUG00000013526 N 0.000
ENSFALG00000004873 Ficedula albicollis ENSFALG00000004873 N 0.000
PRDM10 Monodelphis domestica ENSMODG00000004979 N 0.000
PRDM10 Macaca mulatta ENSMMUG00000017555 N 0.000
PRDM10 Myotis lucifugus ENSMLUG00000013051 N 0.000
PRDM10 Meleagris gallopavo ENSMGAG00000001112 N 0.000
PRDM10 Gorilla gorilla ENSGGOG00000015359 N 0.000
ENSGALG00000001278 Gallus gallus ENSGALG00000001278 N 0.000
PRDM10 Homo sapiens ENSG00000170325 N 0.000
PRDM10 Felis catus ENSFCAG00000004111 N 0.000
PRDM10 Anolis carolinensis ENSACAG00000017654 N 0.000