CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0001s0017
(
Capsella grandiflora
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
Cagra.0001s0017
T355864_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY71
M07374_2.00
Arabidopsis thaliana
HAAAGTCAAMN
NKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY71_col_a
0.808
0.621
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0001s0017.1.p
WRKY
338
395
EDGFRWRKYGQKVVKGNPNPRSYFKCTNNDCNVKKHVERGADNCKILVTSYDGIHNHP
Links
Other
WRKY
family TFs
Other
Capsella grandiflora
TFs
382 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy