Cagra.0255s0014 (Capsella grandiflora)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Cagra.0255s0014 T355871_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY62
M02561_2.00
Arabidopsis thaliana
TRGTCAAM

KTTGACYA
PBM
Weirauch et al.(2014)
pTH8246
0.880 0.932
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN

NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.854 0.695
WRKY63
M02546_2.00
Arabidopsis thaliana
NGGTCAAN

NTTGACCN
PBM
Weirauch et al.(2014)
pTH8182
0.844 0.695
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0255s0014.1.p WRKY 110 170

Links

Other WRKY family TFs
Other Capsella grandiflora TFs

172 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.891
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.882
Bra028918 Brassica rapa Bra028918 I 0.881
WRKY62 Arabidopsis thaliana AT5G01900 D 0.880
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.880
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.880
Bo5g068250 Brassica oleracea Bo5g068250 I 0.874
Bra023211 Brassica rapa Bra023211 I 0.874
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.856
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.856
WRKY38 Arabidopsis thaliana AT5G22570 D 0.854
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.854
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.852
WRKY66 Arabidopsis thaliana AT1G80590 I 0.849
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.846
Bo2g095820 Brassica oleracea Bo2g095820 I 0.846
Bra008459 Brassica rapa Bra008459 I 0.846
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.846
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.845
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.845
WRKY63 Arabidopsis thaliana AT1G66600 D 0.844
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.844
Bra008454 Brassica rapa Bra008454 I 0.844
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.843
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.843
WRKY67 Arabidopsis thaliana AT1G66550 I 0.841
Bra020196 Brassica rapa Bra020196 I 0.840
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.839
WRKY64 Arabidopsis thaliana AT1G66560 I 0.839
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.837
Bo2g024040 Brassica oleracea Bo2g024040 I 0.837
Bra020197 Brassica rapa Bra020197 I 0.837
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.836
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.835
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.835
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.835
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.834
Bo01002s040 Brassica oleracea Bo01002s040 I 0.830
Bra002421 Brassica rapa Bra002421 I 0.830
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.828
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.827
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.827
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.826
Cagra.20277s0001 Capsella grandiflora Cagra.20277s0001 I 0.826
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.826
OS05G0478800 Oryza sativa OS05G0478800 I 0.826
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.826
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.826
OB05G17240 Oryza brachyantha OB05G17240 I 0.823
Bra008456 Brassica rapa Bra008456 I 0.823
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.823
OPUNC05G17980 Oryza punctata OPUNC05G17980 I 0.823
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I 0.822
OMERI05G18170 Oryza meridionalis OMERI05G18170 I 0.820
ONIVA05G21440 Oryza nivara ONIVA05G21440 I 0.820
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I 0.820
OPUNC05G18000 Oryza punctata OPUNC05G18000 I 0.820
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I 0.820
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I 0.820
OS05G0478400 Oryza sativa OS05G0478400 I 0.820
BGIOSGA030346 Oryza indica BGIOSGA030346 I 0.820
OLONG_002978 Oryza longistaminata OLONG_002978 I 0.819
OB05G27850 Oryza brachyantha OB05G27850 I 0.819
OBART05G20330 Oryza barthii OBART05G20330 I 0.819
ORGLA05G0177400 Oryza glaberrima ORGLA05G0177400 I 0.819
LPERR05G06630 Leersia perrieri LPERR05G06630 I 0.819
OLONG_027124 Oryza longistaminata OLONG_027124 I 0.818
MDP0000828055 Malus domestica MDP0000828055 I 0.818
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.818
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.818
OMERI05G18260 Oryza meridionalis OMERI05G18260 I 0.818
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.818
OBART05G20340 Oryza barthii OBART05G20340 I 0.818
ONIVA11G01240 Oryza nivara ONIVA11G01240 I 0.817
ORGLA11G0202000 Oryza glaberrima ORGLA11G0202000 I 0.817
LPERR11G00960 Leersia perrieri LPERR11G00960 I 0.817
OBART11G01110 Oryza barthii OBART11G01110 I 0.817
OGLUM11G00870 Oryza glumaepatula OGLUM11G00870 I 0.817
MTR_5g067680 Medicago truncatula MTR_5g067680 I 0.817
BRADI1G63220 Brachypodium distachyon BRADI1G63220 I 0.817
WRKY55 Vitis vinifera VIT_13s0067g03130 I 0.817
BGIOSGA034612 Oryza indica BGIOSGA034612 I 0.817
OB05G27830 Oryza brachyantha OB05G27830 I 0.817
ORUFI05G08750 Oryza rufipogon ORUFI05G08750 I 0.816
Pavir.J39511 Panicum virgatum Pavir.J39511 I 0.816
Pm019076 Prunus mume Pm019076 I 0.816
ORGLA05G0070000 Oryza glaberrima ORGLA05G0070000 I 0.816
TCM_045555 Theobroma cacao TCM_045555 I 0.816
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I 0.816
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I 0.816
OPUNC05G07410 Oryza punctata OPUNC05G07410 I 0.816
ONIVA05G08650 Oryza nivara ONIVA05G08650 I 0.816
ONIVA09G03360 Oryza nivara ONIVA09G03360 I 0.816
OLONG_019907 Oryza longistaminata OLONG_019907 I 0.816
OBART05G08130 Oryza barthii OBART05G08130 I 0.816
OGLUM05G08540 Oryza glumaepatula OGLUM05G08540 I 0.816
OGLUM11G00850 Oryza glumaepatula OGLUM11G00850 I 0.816
Bo6g066790 Brassica oleracea Bo6g066790 I 0.816
BGIOSGA017556 Oryza indica BGIOSGA017556 I 0.816
BGIOSGA030113 Oryza indica BGIOSGA030113 I 0.816
OB01G44150 Oryza brachyantha OB01G44150 I 0.816
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I 0.815
OGLUM05G21440 Oryza glumaepatula OGLUM05G21440 I 0.815
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.815
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.814
MLOC_78461 Hordeum vulgare MLOC_78461 I 0.814
Traes_4AS_0DA136E0E Triticum aestivum Traes_4AS_0DA136E0E I 0.814
MDP0000460139 Malus domestica MDP0000460139 I 0.814
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.814
ORGLA09G0026100 Oryza glaberrima ORGLA09G0026100 I 0.814
OGLUM05G21510 Oryza glumaepatula OGLUM05G21510 I 0.814
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.814
OPUNC05G18030 Oryza punctata OPUNC05G18030 I 0.813
LPERR12G01070 Leersia perrieri LPERR12G01070 I 0.813
Gorai.012G014000 Gossypium raimondii Gorai.012G014000 I 0.813
GLYMA04G40121 Glycine max GLYMA04G40121 I 0.813
F775_07376 Aegilops tauschii F775_07376 I 0.813
GLYMA06G14731 Glycine max GLYMA06G14731 I 0.812
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.812
MLOC_68369 Hordeum vulgare MLOC_68369 N 0.812
PRUPE_ppa014826mg Prunus persica PRUPE_ppa014826mg I 0.812
LPERR01G30490 Leersia perrieri LPERR01G30490 I 0.812
mgf026576m Mimulus guttatus mgf026576m I 0.811
OBART12G00850 Oryza barthii OBART12G00850 N 0.811
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.811
BGIOSGA036756 Oryza indica BGIOSGA036756 N 0.811
29729.m002370 Ricinus communis 29729.m002370 I 0.811
ORGLA12G0007600 Oryza glaberrima ORGLA12G0007600 N 0.811
Si028202m.g Setaria italica Si028202m.g I 0.811
OS12G0116700 Oryza sativa OS12G0116700 N 0.811
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I 0.811
POPTR_0013s09460 Populus trichocarpa POPTR_0013s09460 I 0.810
Pavir.Gb01556 Panicum virgatum Pavir.Gb01556 I 0.810
SELMODRAFT_113487 Selaginella moellendorffii SELMODRAFT_113487 I 0.810
PGSC0003DMG400008776 Solanum tuberosum PGSC0003DMG400008776 I 0.810
F775_23346 Aegilops tauschii F775_23346 N 0.810
OMERI11G01570 Oryza meridionalis OMERI11G01570 N 0.810
OS11G0117500 Oryza sativa OS11G0117500 N 0.810
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.810
29729.m002330 Ricinus communis 29729.m002330 I 0.810
SELMODRAFT_29692 Selaginella moellendorffii SELMODRAFT_29692 I 0.810
Traes_5BL_175E7FC38 Triticum aestivum Traes_5BL_175E7FC38 N 0.810
OB11G10760 Oryza brachyantha OB11G10760 N 0.810
TRIUR3_24639 Triticum urartu TRIUR3_24639 N 0.810
Traes_5DL_09F1F8F79 Triticum aestivum Traes_5DL_09F1F8F79 N 0.810
OB12G11030 Oryza brachyantha OB12G11030 N 0.810
ORGLA11G0201900 Oryza glaberrima ORGLA11G0201900 N 0.809
OPUNC11G00970 Oryza punctata OPUNC11G00970 N 0.809
OMERI11G01520 Oryza meridionalis OMERI11G01520 N 0.809
MDP0000578301 Malus domestica MDP0000578301 I 0.809
ONIVA11G01230 Oryza nivara ONIVA11G01230 N 0.809
OS11G0117400 Oryza sativa OS11G0117400 N 0.809
BGIOSGA036757 Oryza indica BGIOSGA036757 N 0.809
Pm003014 Prunus mume Pm003014 I 0.809
BGIOSGA034613 Oryza indica BGIOSGA034613 N 0.809
ORGLA12G0007500 Oryza glaberrima ORGLA12G0007500 N 0.809
ONIVA11G01050 Oryza nivara ONIVA11G01050 N 0.809
F775_24185 Aegilops tauschii F775_24185 I 0.809
Si012735m.g Setaria italica Si012735m.g I 0.809
OGLUM12G01400 Oryza glumaepatula OGLUM12G01400 N 0.809
OBART11G01100 Oryza barthii OBART11G01100 N 0.809
OPUNC12G00970 Oryza punctata OPUNC12G00970 N 0.809
Sb08g002560 Sorghum bicolor Sb08g002560 N 0.809
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.809
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.809
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.809
OS12G0116600 Oryza sativa OS12G0116600 N 0.809
Ca_21669 Cicer arietinum Ca_21669 I 0.809
TRIUR3_06813 Triticum urartu TRIUR3_06813 I 0.808
Si025181m.g Setaria italica Si025181m.g I 0.808
F775_15928 Aegilops tauschii F775_15928 I 0.808
Bra016975 Brassica rapa Bra016975 I 0.808