Cagra.0483s0080 (Capsella grandiflora)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Cagra.0483s0080 T355877_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY46
M07395_2.00
Arabidopsis thaliana
VAAAGTCAAMG

CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY46_col_a
0.868 0.831
WRKY46
M07396_2.00
Arabidopsis thaliana
HRAAGTCAACG

CGTTGACTTYD
Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a
0.868 0.831
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0483s0080.1.p WRKY 110 170

Links

Other WRKY family TFs
Other Capsella grandiflora TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Carubv10019489m.g Capsella rubella Carubv10019489m.g I 0.882
fgenesh1_pm.C_scaffold_5002145 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5002145 I 0.881
Bostr.13158s0168 Boechera stricta Bostr.13158s0168 I 0.879
Bo4g009270 Brassica oleracea Bo4g009270 I 0.873
Bra004540 Brassica rapa Bra004540 I 0.873
Bo3g039240 Brassica oleracea Bo3g039240 I 0.869
WRKY46 Arabidopsis thaliana AT2G46400 D 0.868
Bra000423 Brassica rapa Bra000423 I 0.866
Bostr.25993s0129 Boechera stricta Bostr.25993s0129 I 0.865
Bo4g101290 Brassica oleracea Bo4g101290 I 0.863
Carubv10023578m.g Capsella rubella Carubv10023578m.g I 0.863
Cagra.0050s0059 Capsella grandiflora Cagra.0050s0059 I 0.863
Bra014426 Brassica rapa Bra014426 I 0.862
WRKY46 Arabidopsis lyrata fgenesh2_kg.4__2854__AT2G46400.1 I 0.858
Thhalv10001568m.g Eutrema salsugineum Thhalv10001568m.g I 0.854
F775_21933 Aegilops tauschii F775_21933 I 0.842
BRADI1G17660 Brachypodium distachyon BRADI1G17660 I 0.839
BRADI2G30695 Brachypodium distachyon BRADI2G30695 I 0.830
Gorai.007G107300 Gossypium raimondii Gorai.007G107300 I 0.830
evm.TU.contig_32256 Carica papaya evm.TU.contig_32256 I 0.829
TCM_005179 Theobroma cacao TCM_005179 I 0.829
Cla015244 Citrullus lanatus Cla015244 I 0.829
Gorai.001G155800 Gossypium raimondii Gorai.001G155800 I 0.829
Cucsa.259110 Cucumis sativus Cucsa.259110 I 0.827
Cucsa.078810 Cucumis sativus Cucsa.078810 I 0.825
SELMODRAFT_29702 Selaginella moellendorffii SELMODRAFT_29702 I 0.823
cassava7221.valid.m1 Manihot esculenta cassava7221.valid.m1 I 0.823
SELMODRAFT_29703 Selaginella moellendorffii SELMODRAFT_29703 I 0.823
GSMUA_Achr3G25080_001 Musa acuminata GSMUA_Achr3G25080_001 I 0.822
MDP0000455180 Malus domestica MDP0000455180 I 0.822
mgf020540m Mimulus guttatus mgf020540m I 0.822
MDP0000727570 Malus domestica MDP0000727570 I 0.822
Pavir.Ba02544 Panicum virgatum Pavir.Ba02544 I 0.822
POPTR_0014s09190 Populus trichocarpa POPTR_0014s09190 I 0.821
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I 0.821
MTR_3g090860 Medicago truncatula MTR_3g090860 I 0.821
Pm003013 Prunus mume Pm003013 I 0.821
Pavir.Ba00227 Panicum virgatum Pavir.Ba00227 I 0.820
OB07G31890 Oryza brachyantha OB07G31890 I 0.820
RRS1 Arabidopsis lyrata Al_scaffold_0008_337 I 0.820
orange1.1g017895m.g Citrus sinensis orange1.1g017895m.g I 0.820
Ciclev10020744m.g Citrus clementina Ciclev10020744m.g I 0.820
Cucsa.143830 Cucumis sativus Cucsa.143830 I 0.820
OPUNC07G24890 Oryza punctata OPUNC07G24890 I 0.820
Eucgr.K00331 Eucalyptus grandis Eucgr.K00331 I 0.819
Aquca_013_00135 Aquilegia coerulea Aquca_013_00135 I 0.819
PGSC0003DMG400012160 Solanum tuberosum PGSC0003DMG400012160 I 0.819
MDP0000578301 Malus domestica MDP0000578301 I 0.819
GRMZM2G139815 Zea mays GRMZM2G139815 I 0.819
Ca_03952 Cicer arietinum Ca_03952 I 0.819
SapurV1A.0190s0060 Salix purpurea SapurV1A.0190s0060 I 0.819
SapurV1A.2295s0010 Salix purpurea SapurV1A.2295s0010 I 0.819
mgf006355m Mimulus guttatus mgf006355m I 0.819
Cucsa.012940 Cucumis sativus Cucsa.012940 I 0.819
mgf015087m Mimulus guttatus mgf015087m I 0.819
Sb02g043030 Sorghum bicolor Sb02g043030 I 0.819
Sb06g013835 Sorghum bicolor Sb06g013835 I 0.819
Cla021486 Citrullus lanatus Cla021486 I 0.818
SapurV1A.0013s0590 Salix purpurea SapurV1A.0013s0590 I 0.818
Gorai.007G014600 Gossypium raimondii Gorai.007G014600 I 0.818
Si030528m.g Setaria italica Si030528m.g I 0.818
30169.m006533 Ricinus communis 30169.m006533 I 0.817
OS07G0680400 Oryza sativa OS07G0680400 I 0.817
PGSC0003DMG400009103 Solanum tuberosum PGSC0003DMG400009103 I 0.817
MLOC_74606 Hordeum vulgare MLOC_74606 I 0.817
Solyc03g007380.1 Solanum lycopersicum Solyc03g007380.1 I 0.817
GSMUA_AchrUn_randomG24820_001 Musa acuminata GSMUA_AchrUn_randomG24820_001 I 0.816
GRMZM2G061408 Zea mays GRMZM2G061408 I 0.816
GSMUA_Achr7G14140_001 Musa acuminata GSMUA_Achr7G14140_001 I 0.816
GRMZM2G025895 Zea mays GRMZM2G025895 I 0.816
BGIOSGA023706 Oryza indica BGIOSGA023706 I 0.816
LjT41F16.60.nd Lotus japonicus LjT41F16.60.nd I 0.816
LPERR07G23280 Leersia perrieri LPERR07G23280 I 0.816
28690.m000025 Ricinus communis 28690.m000025 I 0.816
ONIVA07G26140 Oryza nivara ONIVA07G26140 I 0.816
ORGLA07G0207800 Oryza glaberrima ORGLA07G0207800 I 0.816
OMERI07G23060 Oryza meridionalis OMERI07G23060 I 0.816
OGLUM07G26470 Oryza glumaepatula OGLUM07G26470 I 0.816
ORUFI07G27440 Oryza rufipogon ORUFI07G27440 I 0.816
OBART07G26430 Oryza barthii OBART07G26430 I 0.816
Solyc08g082110.2 Solanum lycopersicum Solyc08g082110.2 I 0.815
evm.TU.supercontig_3.53 Carica papaya evm.TU.supercontig_3.53 I 0.815
GLYMA06G13090 Glycine max GLYMA06G13090 I 0.815
GSMUA_Achr3G15840_001 Musa acuminata GSMUA_Achr3G15840_001 I 0.815
GLYMA04G41701 Glycine max GLYMA04G41701 I 0.815
SapurV1A.0377s0020 Salix purpurea SapurV1A.0377s0020 I 0.815
SapurV1A.1043s0030 Salix purpurea SapurV1A.1043s0030 I 0.815
MDP0000191017 Malus domestica MDP0000191017 I 0.815
GSMUA_Achr1G27980_001 Musa acuminata GSMUA_Achr1G27980_001 I 0.815
POPTR_0012s01380 Populus trichocarpa POPTR_0012s01380 I 0.815
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I 0.815
OLONG_008209 Oryza longistaminata OLONG_008209 I 0.815
gene19219-v1.0-hybrid Fragaria vesca gene19219-v1.0-hybrid I 0.815
cassava36814.valid.m1 Manihot esculenta cassava36814.valid.m1 I 0.814
Sb02g022280 Sorghum bicolor Sb02g022280 I 0.814
BRADI4G28280 Brachypodium distachyon BRADI4G28280 I 0.814
cassava36815.valid.m1 Manihot esculenta cassava36815.valid.m1 I 0.814
LPERR09G04330 Leersia perrieri LPERR09G04330 I 0.814
Cla004301 Citrullus lanatus Cla004301 I 0.814
LjSGA_021425.1 Lotus japonicus LjSGA_021425.1 I 0.813
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.813
Si027574m.g Setaria italica Si027574m.g I 0.813
Si030395m.g Setaria italica Si030395m.g I 0.813
LPERR08G11030 Leersia perrieri LPERR08G11030 I 0.813
Pavir.Bb02088 Panicum virgatum Pavir.Bb02088 I 0.812
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I 0.812
Pavir.Ba02545 Panicum virgatum Pavir.Ba02545 I 0.812
MDP0000754989 Malus domestica MDP0000754989 I 0.812
GRMZM2G163418 Zea mays GRMZM2G163418 I 0.812
Pavir.J05812 Panicum virgatum Pavir.J05812 I 0.812
Pavir.J07662 Panicum virgatum Pavir.J07662 I 0.812
PDK_20s1440981g001 Phoenix dactylifera PDK_20s1440981g001 I 0.812
PK21971.1 Cannabis sativa PK21971.1 I 0.812
Bra019265 Brassica rapa Bra019265 I 0.812
Pavir.J35902 Panicum virgatum Pavir.J35902 I 0.812
Gorai.008G270600 Gossypium raimondii Gorai.008G270600 I 0.812
GSMUA_Achr9G04830_001 Musa acuminata GSMUA_Achr9G04830_001 I 0.812
TCM_015346 Theobroma cacao TCM_015346 I 0.812
MLOC_74974 Hordeum vulgare MLOC_74974 I 0.811
Pm018401 Prunus mume Pm018401 I 0.811
PRUPE_ppa007708mg Prunus persica PRUPE_ppa007708mg I 0.811
Aquca_030_00182 Aquilegia coerulea Aquca_030_00182 I 0.811
Bra013732 Brassica rapa Bra013732 I 0.811
Thhalv10025724m.g Eutrema salsugineum Thhalv10025724m.g I 0.811
gene13108-v1.0-hybrid Fragaria vesca gene13108-v1.0-hybrid I 0.811
Solyc10g009550.2 Solanum lycopersicum Solyc10g009550.2 I 0.811
PDK_20s1521921g002 Phoenix dactylifera PDK_20s1521921g002 I 0.811
VIT_15s0046g01140 Vitis vinifera VIT_15s0046g01140 I 0.811
AMTR_s00015p00229650 Amborella trichopoda AMTR_s00015p00229650 I 0.810
MDP0000767097 Malus domestica MDP0000767097 I 0.810
AMTR_s00015p00228580 Amborella trichopoda AMTR_s00015p00228580 I 0.810
GSMUA_Achr5G07490_001 Musa acuminata GSMUA_Achr5G07490_001 I 0.810
Pavir.J41073 Panicum virgatum Pavir.J41073 I 0.810
BRADI3G34850 Brachypodium distachyon BRADI3G34850 I 0.810
PGSC0003DMG400019884 Solanum tuberosum PGSC0003DMG400019884 I 0.810
MLOC_5971 Hordeum vulgare MLOC_5971 I 0.810
Carubv10017349m.g Capsella rubella Carubv10017349m.g I 0.810
30174.m008651 Ricinus communis 30174.m008651 I 0.810
RRS1 Arabidopsis thaliana AT5G45260 I 0.810
cassava43538.valid.m1 Manihot esculenta cassava43538.valid.m1 I 0.810
GLYMA14G36430 Glycine max GLYMA14G36430 I 0.810
PRUPE_ppa007986mg Prunus persica PRUPE_ppa007986mg I 0.809
Si030531m.g Setaria italica Si030531m.g I 0.809
BRADI1G63220 Brachypodium distachyon BRADI1G63220 I 0.809
SapurV1A.0035s0630 Salix purpurea SapurV1A.0035s0630 I 0.809
Pm019783 Prunus mume Pm019783 I 0.809
GRMZM2G381378 Zea mays GRMZM2G381378 I 0.809
OBART05G20340 Oryza barthii OBART05G20340 I 0.809
MTR_8g027860 Medicago truncatula MTR_8g027860 I 0.809
OPUNC09G05480 Oryza punctata OPUNC09G05480 I 0.809
Lus10001902.g Linum usitatissimum Lus10001902.g I 0.809
OMERI05G18260 Oryza meridionalis OMERI05G18260 I 0.809
Bo4g012750 Brassica oleracea Bo4g012750 I 0.808
Bo7g109140 Brassica oleracea Bo7g109140 I 0.808
BGIOSGA040489 Oryza indica BGIOSGA040489 I 0.808
GLYMA19G44380 Glycine max GLYMA19G44380 I 0.808
Cagra.1226s0044 Capsella grandiflora Cagra.1226s0044 I 0.808
Carubv10006884m.g Capsella rubella Carubv10006884m.g I 0.808
ORGLA08G0116200 Oryza glaberrima ORGLA08G0116200 I 0.808
ORUFI08G15010 Oryza rufipogon ORUFI08G15010 I 0.808
ORUFI09G06720 Oryza rufipogon ORUFI09G06720 I 0.808
ONIVA08G13920 Oryza nivara ONIVA08G13920 I 0.808
OMERI08G11390 Oryza meridionalis OMERI08G11390 I 0.808
OS09G0334500 Oryza sativa OS09G0334500 I 0.808
Pavir.Ca02012 Panicum virgatum Pavir.Ca02012 I 0.808
OS08G0386200 Oryza sativa OS08G0386200 I 0.808
gene13546-v1.0-hybrid Fragaria vesca gene13546-v1.0-hybrid I 0.808
OGLUM07G10380 Oryza glumaepatula OGLUM07G10380 I 0.808
Sb02g022290 Sorghum bicolor Sb02g022290 I 0.808