Cagra.0569s0010 (Capsella grandiflora)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Cagra.0569s0010 T355880_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY8
M02564_2.00
Arabidopsis thaliana
NRGTCAAHN

NDTTGACYN
PBM
Weirauch et al.(2014)
pTH7554
0.797 1.000
WRKY28
M07406_2.00
Arabidopsis thaliana
HAAAGTCAAMNNH

DNNKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY28_col_a
0.797 1.000
WRKY28
M07407_2.00
Arabidopsis thaliana
VAAAGTCAAMG

CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY28_colamp_a
0.797 1.000
WRKY71
M07374_2.00
Arabidopsis thaliana
HAAAGTCAAMN

NKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY71_col_a
0.797 1.000
WRKY8
M07428_2.00
Arabidopsis thaliana
NAAAAGTCAACRNHW

WDNYGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY8_colamp_a
0.797 1.000
WRKY8
M07429_2.00
Arabidopsis thaliana
NNVAAAGTCAACRNH

DNYGTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY8_col
0.797 1.000
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0569s0010.1.p WRKY 187 207

Links

Other WRKY family TFs
Other Capsella grandiflora TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ciclev10032012m.g Citrus clementina Ciclev10032012m.g I 0.797
Eucgr.B03165 Eucalyptus grandis Eucgr.B03165 I 0.797
Eucgr.K01219 Eucalyptus grandis Eucgr.K01219 I 0.797
Gorai.010G164700 Gossypium raimondii Gorai.010G164700 I 0.797
Carubv10026746m.g Capsella rubella Carubv10026746m.g I 0.797
Carubv10009934m.g Capsella rubella Carubv10009934m.g I 0.797
Cucsa.239590 Cucumis sativus Cucsa.239590 I 0.797
Aquca_002_00789 Aquilegia coerulea Aquca_002_00789 I 0.797
Bostr.8819s0173 Boechera stricta Bostr.8819s0173 I 0.797
Cagra.5647s0024 Capsella grandiflora Cagra.5647s0024 I 0.797
Gorai.012G040700 Gossypium raimondii Gorai.012G040700 I 0.797
Lus10004612.g Linum usitatissimum Lus10004612.g I 0.797
SapurV1A.0354s0060 Salix purpurea SapurV1A.0354s0060 I 0.797
Thhalv10001240m.g Eutrema salsugineum Thhalv10001240m.g I 0.797
LjSGA_008140.3 Lotus japonicus LjSGA_008140.3 I 0.797
PDK_20s1303931g001 Phoenix dactylifera PDK_20s1303931g001 I 0.797
Pavir.J35195 Panicum virgatum Pavir.J35195 I 0.797
Pavir.J17549 Panicum virgatum Pavir.J17549 N 0.797
MDP0000118810 Malus domestica MDP0000118810 I 0.797
MDP0000257129 Malus domestica MDP0000257129 I 0.797
orange1.1g019375m.g Citrus sinensis orange1.1g019375m.g I 0.797
cassava42343.valid.m1 Manihot esculenta cassava42343.valid.m1 I 0.797
Pm014610 Prunus mume Pm014610 I 0.797
Bra012614 Brassica rapa Bra012614 I 0.797
Bra022033 Brassica rapa Bra022033 I 0.797
Bra025021 Brassica rapa Bra025021 I 0.797
Bra040926 Brassica rapa Bra040926 I 0.797
Bo7g105800 Brassica oleracea Bo7g105800 I 0.797
Bo7g075300 Brassica oleracea Bo7g075300 I 0.797
WRKY28 Arabidopsis thaliana AT4G18170 D 0.797
WRKY8 Arabidopsis thaliana AT5G46350 D 0.797
Bo2g130010 Brassica oleracea Bo2g130010 I 0.797
WRKY71 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002413 I 0.797
WRKY8 Arabidopsis lyrata fgenesh2_kg.8__153__AT5G46350.1 I 0.797
TCM_001885 Theobroma cacao TCM_001885 I 0.797
TRAES3BF021100090CFD_g Triticum aestivum TRAES3BF021100090CFD_g I 0.797
TRAES3BF021300010CFD_g Triticum aestivum TRAES3BF021300010CFD_g I 0.797
Cla005606 Citrullus lanatus Cla005606 I 0.797
Solyc02g071130.2 Solanum lycopersicum Solyc02g071130.2 I 0.797
PRUPE_ppa026831mg Prunus persica PRUPE_ppa026831mg I 0.797
GSMUA_Achr4G02800_001 Musa acuminata GSMUA_Achr4G02800_001 I 0.797
GSMUA_AchrUn_randomG17570_001 Musa acuminata GSMUA_AchrUn_randomG17570_001 I 0.797
PGSC0003DMG400009703 Solanum tuberosum PGSC0003DMG400009703 I 0.797
WRKY71 Arabidopsis thaliana AT1G29860 D 0.797