Cagra.6594s0027 (Capsella grandiflora)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Cagra.6594s0027 T355928_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY22
M02557_2.00 		Arabidopsis thaliana
NNNKTMHDNN
NNHDKAMNNN		 PBM
Weirauch et al.(2014)
pTH7320 		0.806 1.000
WRKY22
M07400_2.00 		Arabidopsis thaliana
AAAAGTCAACKNH
DNMGTTGACTTTT		 Dap-seq
OMalley et al.(2016)
WRKY22_colamp_a 		0.806 1.000
WRKY22
M07401_2.00 		Arabidopsis thaliana
NAAAGTCAACKNH
DNMGTTGACTTTN		 Dap-seq
OMalley et al.(2016)
WRKY22_col 		0.806 1.000
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.6594s0027.1.p WRKY 187 207

Links

Other WRKY family TFs
Other Capsella grandiflora TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10007907.g Linum usitatissimum Lus10007907.g I 0.806
Lus10018815.g Linum usitatissimum Lus10018815.g I 0.806
Lus10036399.g Linum usitatissimum Lus10036399.g I 0.806
Gorai.007G103400 Gossypium raimondii Gorai.007G103400 I 0.806
Gorai.004G160100 Gossypium raimondii Gorai.004G160100 I 0.806
gene19019-v1.0-hybrid Fragaria vesca gene19019-v1.0-hybrid I 0.806
gene31843-v1.0-hybrid Fragaria vesca gene31843-v1.0-hybrid I 0.806
MDP0000247896 Malus domestica MDP0000247896 I 0.806
orange1.1g019126m.g Citrus sinensis orange1.1g019126m.g I 0.806
SapurV1A.0099s0300 Salix purpurea SapurV1A.0099s0300 I 0.806
Thhalv10028843m.g Eutrema salsugineum Thhalv10028843m.g I 0.806
chr1.LjT16J16.70.nd Lotus japonicus chr1.LjT16J16.70.nd I 0.806
SapurV1A.0013s1050 Salix purpurea SapurV1A.0013s1050 I 0.806
Pavir.Eb01390 Panicum virgatum Pavir.Eb01390 I 0.806
Pavir.Aa02702 Panicum virgatum Pavir.Aa02702 I 0.806
Pavir.Ea01906 Panicum virgatum Pavir.Ea01906 I 0.806
Ciclev10020943m.g Citrus clementina Ciclev10020943m.g I 0.806
Carubv10001446m.g Capsella rubella Carubv10001446m.g I 0.806
GSMUA_Achr8G19810_001 Musa acuminata GSMUA_Achr8G19810_001 I 0.806
POPTR_0002s16590 Populus trichocarpa POPTR_0002s16590 I 0.806
POPTR_0014s08600 Populus trichocarpa POPTR_0014s08600 I 0.806
GSMUA_Achr7G14300_001 Musa acuminata GSMUA_Achr7G14300_001 I 0.806
GSMUA_Achr10G22020_001 Musa acuminata GSMUA_Achr10G22020_001 I 0.806
BRADI3G09810 Brachypodium distachyon BRADI3G09810 I 0.806
WRKY22 Arabidopsis lyrata fgenesh2_kg.6__3581__AT4G01250.1 I 0.806
PRUPE_ppa025013mg Prunus persica PRUPE_ppa025013mg I 0.806
Sb04g009800 Sorghum bicolor Sb04g009800 I 0.806
cassava40183.m1 Manihot esculenta cassava40183.m1 I 0.806
cassava46457.m1 Manihot esculenta cassava46457.m1 I 0.806
Bostr.10064s0007 Boechera stricta Bostr.10064s0007 I 0.806
30174.m008663 Ricinus communis 30174.m008663 I 0.806
Pm023948 Prunus mume Pm023948 I 0.806
Si017529m.g Setaria italica Si017529m.g I 0.806
WRKY29 Vitis vinifera VIT_02s0025g00420 I 0.806
WRKY22 Arabidopsis thaliana AT4G01250 D 0.806