Carubv10021899m.g (Capsella rubella)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Carubv10021899m.g T355979_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY63
M02546_2.00
Arabidopsis thaliana
NGGTCAAN

NTTGACCN
PBM
Weirauch et al.(2014)
pTH8182
0.870 0.763
WRKY62
M02561_2.00
Arabidopsis thaliana
TRGTCAAM

KTTGACYA
PBM
Weirauch et al.(2014)
pTH8246
0.848 0.644
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN

NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.843 0.678
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10021899m WRKY 102 162

Links

Other WRKY family TFs
Other Capsella rubella TFs

Invalid Input OrderBy

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action