Carubv10022162m.g (Capsella rubella)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Carubv10022162m.g T355982_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.853 0.773
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.835 0.614
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.827 0.591
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10022162m WRKY 98 143

Links

Other WRKY family TFs
Other Capsella rubella TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.867
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.867
WRKY63 Arabidopsis thaliana AT1G66600 D 0.853
WRKY66 Arabidopsis thaliana AT1G80590 I 0.852
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.851
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.850
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.849
WRKY67 Arabidopsis thaliana AT1G66550 I 0.847
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.847
WRKY64 Arabidopsis thaliana AT1G66560 I 0.843
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.838
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.837
Bra008459 Brassica rapa Bra008459 I 0.836
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.836
Bo2g095820 Brassica oleracea Bo2g095820 I 0.836
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.835
WRKY38 Arabidopsis thaliana AT5G22570 D 0.835
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.835
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.835
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.834
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.834
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.834
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.834
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.833
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.832
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.828
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.828
Bra028918 Brassica rapa Bra028918 I 0.828
ORUFI05G08750 Oryza rufipogon ORUFI05G08750 I 0.827
OGLUM05G08540 Oryza glumaepatula OGLUM05G08540 I 0.827
OBART05G08130 Oryza barthii OBART05G08130 I 0.827
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.827
OB05G17240 Oryza brachyantha OB05G17240 I 0.827
OPUNC05G07410 Oryza punctata OPUNC05G07410 I 0.827
ORGLA05G0070000 Oryza glaberrima ORGLA05G0070000 I 0.827
ONIVA05G08650 Oryza nivara ONIVA05G08650 I 0.827
OLONG_019907 Oryza longistaminata OLONG_019907 I 0.827
WRKY62 Arabidopsis thaliana AT5G01900 D 0.827
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.827
BGIOSGA017556 Oryza indica BGIOSGA017556 I 0.827
LPERR05G06630 Leersia perrieri LPERR05G06630 I 0.827
Bra020196 Brassica rapa Bra020196 I 0.825
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.825
Bra008454 Brassica rapa Bra008454 I 0.824
Bra020197 Brassica rapa Bra020197 I 0.823
Bo2g024040 Brassica oleracea Bo2g024040 I 0.823
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.821
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I 0.820
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I 0.820
Pavir.J39511 Panicum virgatum Pavir.J39511 I 0.820
BRADI4G44370 Brachypodium distachyon BRADI4G44370 N 0.819
Bra023211 Brassica rapa Bra023211 I 0.819
LPERR11G00960 Leersia perrieri LPERR11G00960 I 0.819
Bo5g068250 Brassica oleracea Bo5g068250 I 0.819
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.819
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.819
Si025181m.g Setaria italica Si025181m.g I 0.819
ONIVA11G01240 Oryza nivara ONIVA11G01240 I 0.817
BGIOSGA034612 Oryza indica BGIOSGA034612 I 0.817
ORGLA11G0202000 Oryza glaberrima ORGLA11G0202000 I 0.817
OBART11G01110 Oryza barthii OBART11G01110 I 0.817
OGLUM11G00870 Oryza glumaepatula OGLUM11G00870 I 0.817
TRIUR3_26571 Triticum urartu TRIUR3_26571 N 0.816
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.816
F775_02479 Aegilops tauschii F775_02479 N 0.816
LPERR12G01070 Leersia perrieri LPERR12G01070 I 0.815
Sb08g002560 Sorghum bicolor Sb08g002560 N 0.815
ONIVA09G03360 Oryza nivara ONIVA09G03360 I 0.814
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I 0.814
OLONG_002978 Oryza longistaminata OLONG_002978 I 0.814
Pavir.J34713 Panicum virgatum Pavir.J34713 N 0.814
Si010764m.g Setaria italica Si010764m.g N 0.814
BGIOSGA030113 Oryza indica BGIOSGA030113 I 0.814
Si019098m.g Setaria italica Si019098m.g N 0.813
Bra008456 Brassica rapa Bra008456 I 0.813
Ca_18932 Cicer arietinum Ca_18932 I 0.812
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.812
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.812
Bo01002s040 Brassica oleracea Bo01002s040 I 0.812
Sb05g001220 Sorghum bicolor Sb05g001220 N 0.812
Sb08g002570 Sorghum bicolor Sb08g002570 N 0.812
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.812
ORGLA12G0007500 Oryza glaberrima ORGLA12G0007500 N 0.812
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.812
OS05G0478800 Oryza sativa OS05G0478800 I 0.812
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.812
Bra002421 Brassica rapa Bra002421 I 0.812
OB12G11030 Oryza brachyantha OB12G11030 N 0.811
OB11G10760 Oryza brachyantha OB11G10760 N 0.811
BGIOSGA036756 Oryza indica BGIOSGA036756 N 0.811
OBART12G00850 Oryza barthii OBART12G00850 N 0.811
GRMZM2G169564 Zea mays GRMZM2G169564 N 0.811
OMERI11G01570 Oryza meridionalis OMERI11G01570 N 0.811
ORGLA09G0026100 Oryza glaberrima ORGLA09G0026100 I 0.811
OGLUM11G00850 Oryza glumaepatula OGLUM11G00850 I 0.811
OS11G0117500 Oryza sativa OS11G0117500 N 0.811
Si027360m.g Setaria italica Si027360m.g N 0.811
ORGLA12G0007600 Oryza glaberrima ORGLA12G0007600 N 0.811
OS12G0116700 Oryza sativa OS12G0116700 N 0.811
OPUNC05G17980 Oryza punctata OPUNC05G17980 I 0.810
F775_02480 Aegilops tauschii F775_02480 N 0.810
GSMUA_Achr7G22020_001 Musa acuminata GSMUA_Achr7G22020_001 I 0.810
Traes_5AL_69A969FF4 Triticum aestivum Traes_5AL_69A969FF4 N 0.810
Si010832m.g Setaria italica Si010832m.g N 0.810
Pavir.Ga01476 Panicum virgatum Pavir.Ga01476 N 0.809
ONIVA11G01050 Oryza nivara ONIVA11G01050 N 0.809
OGLUM12G01400 Oryza glumaepatula OGLUM12G01400 N 0.809
Cagra.20277s0001 Capsella grandiflora Cagra.20277s0001 I 0.809
OBART11G01100 Oryza barthii OBART11G01100 N 0.809
BGIOSGA036757 Oryza indica BGIOSGA036757 N 0.809
BGIOSGA034613 Oryza indica BGIOSGA034613 N 0.809
ONIVA11G01230 Oryza nivara ONIVA11G01230 N 0.809
OMERI11G01520 Oryza meridionalis OMERI11G01520 N 0.809
OS11G0117400 Oryza sativa OS11G0117400 N 0.809
OS12G0116600 Oryza sativa OS12G0116600 N 0.809
OPUNC11G00970 Oryza punctata OPUNC11G00970 N 0.809
ORGLA11G0201900 Oryza glaberrima ORGLA11G0201900 N 0.809
OPUNC12G00970 Oryza punctata OPUNC12G00970 N 0.809
OMERI05G18260 Oryza meridionalis OMERI05G18260 I 0.808
OB05G27830 Oryza brachyantha OB05G27830 I 0.808
OBART05G20340 Oryza barthii OBART05G20340 I 0.808