Carubv10026463m.g (Capsella rubella)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Carubv10026463m.g T356001_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY48
M02565_2.00
Arabidopsis thaliana
NNVGTCADNN

NNHTGACBNN
PBM
Weirauch et al.(2014)
pTH7552
0.879 0.983
WRKY28
M07406_2.00
Arabidopsis thaliana
HAAAGTCAAMNNH

DNNKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY28_col_a
0.872 0.810
WRKY28
M07407_2.00
Arabidopsis thaliana
VAAAGTCAAMG

CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY28_colamp_a
0.872 0.810
WRKY8
M02564_2.00
Arabidopsis thaliana
NRGTCAAHN

NDTTGACYN
PBM
Weirauch et al.(2014)
pTH7554
0.872 0.793
WRKY8
M07428_2.00
Arabidopsis thaliana
NAAAAGTCAACRNHW

WDNYGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY8_colamp_a
0.872 0.793
WRKY8
M07429_2.00
Arabidopsis thaliana
NNVAAAGTCAACRNH

DNYGTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY8_col
0.872 0.793
WRKY71
M07374_2.00
Arabidopsis thaliana
HAAAGTCAAMN

NKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY71_col_a
0.869 0.828
WRKY23
M02556_2.00
Arabidopsis thaliana
RGTCAACG

CGTTGACY
PBM
Weirauch et al.(2014)
pTH7387
0.860 0.810
WRKY23
M01089_2.00
Arabidopsis thaliana
NRGTCAAM

KTTGACYN
PBM
Sullivan et al.(2014)
pTH7671
0.860 0.810
WRKY57
M02547_2.00
Arabidopsis thaliana
NNRGTCAAHN

NDTTGACYNN
PBM
Weirauch et al.(2014)
pTH7917
0.856 0.828
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN

NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.847 0.707
WRKY27
M02566_2.00
Arabidopsis thaliana
NNGTCHDNN

NNHDGACNN
PBM
Weirauch et al.(2014)
pTH8188
0.834 0.586
WRKY27
M07430_2.00
Arabidopsis thaliana
MAAAGTCAACKNH

DNMGTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY27_col_a
0.834 0.586
WRKY27
M07431_2.00
Arabidopsis thaliana
HAAAGTCAACKNH

DNMGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY27_colamp_a
0.834 0.586
WRKY65
M07372_2.00
Arabidopsis thaliana
NWWAGTCAACG

CGTTGACTWWN
Dap-seq
OMalley et al.(2016)
WRKY65_col_a
0.833 0.552
WRKY65
M07373_2.00
Arabidopsis thaliana
NAAAGTCAACGN

NCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY65_colamp_a
0.833 0.552
WRKY21
M02553_2.00
Arabidopsis thaliana
NNRGTCAAMN

NKTTGACYNN
PBM
Weirauch et al.(2014)
pTH7422
0.833 0.534
WRKY21
M07389_2.00
Arabidopsis thaliana
HAAAGTCAACNNH

DNNGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a
0.833 0.534
WRKY21
M07390_2.00
Arabidopsis thaliana
HAAAGTCAACK

MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_col
0.833 0.534
WRKY75
M02562_2.00
Arabidopsis thaliana
NRGTCAAM

KTTGACYN
PBM
Weirauch et al.(2014)
pTH8821
0.833 0.707
WRKY75
M07420_2.00
Arabidopsis thaliana
NAAAGTCAACGNH

DNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY75_col_a
0.833 0.707
WRKY75
M07421_2.00
Arabidopsis thaliana
VAAAGTCAACRNH

DNYGTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY75_colamp_a
0.833 0.707
WRKY22
M02557_2.00
Arabidopsis thaliana
NNNKTMHDNN

NNHDKAMNNN
PBM
Weirauch et al.(2014)
pTH7320
0.832 0.534
WRKY22
M07400_2.00
Arabidopsis thaliana
AAAAGTCAACKNH

DNMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY22_colamp_a
0.832 0.534
WRKY22
M07401_2.00
Arabidopsis thaliana
NAAAGTCAACKNH

DNMGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY22_col
0.832 0.534
WRKY45
M00899_2.00
Arabidopsis thaliana
NNRGTCAAMGN

NCKTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY45
0.830 0.690
WRKY45
M07397_2.00
Arabidopsis thaliana
NAAAAGTCAAMD

HKTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY45_col_a
0.830 0.690
WRKY45
M07398_2.00
Arabidopsis thaliana
MAAAGTCAAMV

BKTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY45_colamp_a
0.830 0.690
WRKY43
M02555_2.00
Arabidopsis thaliana
NRGTCAAHNN

NNDTTGACYN
PBM
Weirauch et al.(2014)
pTH7373
0.830 0.741
WRKY43
M07393_2.00
Arabidopsis thaliana
NNAAAGTCAACGNN

NNCGTTGACTTTNN
Dap-seq
OMalley et al.(2016)
WRKY43_col_a
0.830 0.741
WRKY43
M07394_2.00
Arabidopsis thaliana
NNNNAAAGTCAACGN

NCGTTGACTTTNNNN
Dap-seq
OMalley et al.(2016)
WRKY43_colamp_a
0.830 0.741
WRKY14
M00731_2.00
Arabidopsis thaliana
NRGTCAAMNN

NNKTTGACYN
PBM
Chang et al.(2013)
pTH7570
0.828 0.517
WRKY14
M07375_2.00
Arabidopsis thaliana
NAAAGTCAACGNN

NNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_col_a
0.828 0.517
WRKY14
M07376_2.00
Arabidopsis thaliana
NAAAGTCAACGNH

DNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_colamp_a
0.828 0.517
WRKY17
M02550_2.00
Arabidopsis thaliana
NNDGTCAAHN

NDTTGACHNN
PBM
Weirauch et al.(2014)
pTH8088
0.827 0.569
WRKY17
M07385_2.00
Arabidopsis thaliana
NHAAAGTCAACRNN

NNYGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY17_col_a
0.827 0.569
WRKY17
M07386_2.00
Arabidopsis thaliana
NMAAAGTCAACGN

NCGTTGACTTTKN
Dap-seq
OMalley et al.(2016)
WRKY17_colamp_a
0.827 0.569
WRKY11
M02559_2.00
Arabidopsis thaliana
NDGTCAAHNN

NNDTTGACHN
PBM
Weirauch et al.(2014)
pTH8091
0.825 0.552
WRKY11
M07415_2.00
Arabidopsis thaliana
NHAAAGTCAACBNH

DNVGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY11_col_a
0.825 0.552
WRKY11
M11464_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY11_Q2
0.825 0.552
WRKY15
M02549_2.00
Arabidopsis thaliana
NRGTCAAMNN

NNKTTGACYN
PBM
Weirauch et al.(2014)
pTH7602
0.824 0.586
WRKY15
M07383_2.00
Arabidopsis thaliana
AAAAGTCAACKN

NMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY15_colamp_a
0.824 0.586
WRKY15
M07384_2.00
Arabidopsis thaliana
NWAAGTCAACB

VGTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY15_col_b
0.824 0.586
WRKY12
M00898_2.00
Arabidopsis thaliana
NHGGTCAACNN

NNGTTGACCDN
PBM
Franco-Zorrilla et al.(2014)
WRKY12
0.820 0.707
WRKY50
M07424_2.00
Arabidopsis thaliana
NNAAAAGTCAAMN

NKTTGACTTTTNN
Dap-seq
OMalley et al.(2016)
WRKY50_col_a
0.820 0.672
WRKY50
M07425_2.00
Arabidopsis thaliana
NWAAGTCAANN

NNTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a
0.820 0.672
Q40828_PETCR
M11467_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY_Q2
0.819 0.534
WRKY24
M07426_2.00
Arabidopsis thaliana
NNNAWAGTCAACGN

NCGTTGACTWTNNN
Dap-seq
OMalley et al.(2016)
WRKY24_col_a
0.819 0.655
WRKY24
M07427_2.00
Arabidopsis thaliana
NAWAGTCAACGNH

DNCGTTGACTWTN
Dap-seq
OMalley et al.(2016)
WRKY24_colamp_a
0.819 0.655
WRKY29
M02558_2.00
Arabidopsis thaliana
NNNGTCHDNN

NNHDGACNNN
PBM
Weirauch et al.(2014)
pTH9604
0.818 0.500
WRKY29
M07410_2.00
Arabidopsis thaliana
HAAAGTCAACK

MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY29_col_a
0.818 0.500
WRKY29
M07411_2.00
Arabidopsis thaliana
HWWAGTCAAMDNN

NNHKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY29_colamp_a
0.818 0.500
PK25870.1
M01325_2.00
Cannabis sativa
NRGTCAAM

KTTGACYN
PBM
Lambert et al.(2019)
pTH10156
0.818 0.655
WRKY7
M07412_2.00
Arabidopsis thaliana
NNDDDNNNNMAAAGTCAACGV

BCGTTGACTTTKNNNNHHHNN
Dap-seq
OMalley et al.(2016)
WRKY7_colamp_a
0.816 0.534
WRKY7
M07413_2.00
Arabidopsis thaliana
NAAAAGTCAACKNN

NNMGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY7_col
0.816 0.534
fgenesh1_pg.C_Chr_11.0001000193
M02570_2.00
Ostreococcus tauri
NRGTCARNN

NNYTGACYN
PBM
Weirauch et al.(2014)
pTH9432
0.815 0.603
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10026463m WRKY 243 300

Links

Other WRKY family TFs
Other Capsella rubella TFs

2194 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZBTB37 Homo sapiens ENSG00000185278 D 0.000
ZBTB37 Tupaia belangeri ENSTBEG00000004052 I 0.000
ENSSTOG00000022488 Ictidomys tridecemlineatus ENSSTOG00000022488 I 0.000
ZBTB37 Sus scrofa ENSSSCG00000015494 I 0.000
ENSSHAG00000006755 Sarcophilus harrisii ENSSHAG00000006755 I 0.000
Zbtb37 Rattus norvegicus ENSRNOG00000026907 I 0.000
ZBTB37 Pteropus vampyrus ENSPVAG00000007588 I 0.000
ZBTB37 Pan troglodytes ENSPTRG00000001700 I 0.000
ENSPSIG00000016668 Pelodiscus sinensis ENSPSIG00000016668 I 0.000
ENSPPYG00000000492 Pongo abelii ENSPPYG00000000492 I 0.000
ENSPFOG00000005554 Poecilia formosa ENSPFOG00000005554 I 0.000
ENSPANG00000002385 Papio anubis ENSPANG00000002385 I 0.000
zbtb37 Oryzias latipes ENSORLG00000014087 I 0.000
ZBTB37 Ochotona princeps ENSOPRG00000013039 I 0.000
ENSONIG00000007779 Oreochromis niloticus ENSONIG00000007779 I 0.000
ZBTB37 Otolemur garnettii ENSOGAG00000027115 I 0.000
ZBTB37 Oryctolagus cuniculus ENSOCUG00000017475 I 0.000
zbtb37 Xenopus tropicalis XB-GENE-979959 I 0.000
ZBTB37 Taeniopygia guttata ENSTGUG00000018373 I 0.000
Pvit_13430 Pogona vitticeps Pvit_13430 I 0.000
Ogr05757 Ophisaurus gracilis Ogr05757 I 0.000
Gfo_R006654 Geospiza fortis Gfo_R006654 I 0.000
ENSP00000415293 Macaca fascicularis ENSP00000415293 I 0.000
ENSBTAP00000038286-D1 Bos grunniens ENSBTAP00000038286-D1 I 0.000
Cmyd_10016816 Chelonia mydas Cmyd_10016816 I 0.000
Brh_R011085 Buceros rhinoceros Brh_R011085 I 0.000
Alligator_sinensis_CCG010563.1 Alligator sinensis Alligator_sinensis_CCG010563.1 I 0.000
Afo_R008170 Aptenodytes forsteri Afo_R008170 I 0.000
Aan_R002665 Calypte anna Aan_R002665 I 0.000
ENSXMAG00000005565 Xiphophorus maculatus ENSXMAG00000005565 I 0.000
ZBTB37 Vicugna pacos ENSVPAG00000002589 I 0.000
ZBTB37 Tursiops truncatus ENSTTRG00000008564 I 0.000
ENSTSYG00000009926 Tarsius syrichta ENSTSYG00000009926 I 0.000
zbtb37 Takifugu rubripes ENSTRUG00000010776 I 0.000
zbtb37 Tetraodon nigroviridis ENSTNIG00000000126 I 0.000
ENSOARG00000012816 Ovis aries ENSOARG00000012816 I 0.000
ZBTB37 Ornithorhynchus anatinus ENSOANG00000000922 I 0.000
ZBTB37 Echinops telfairi ENSETEG00000019314 I 0.000
ZBTB37 Erinaceus europaeus ENSEEUG00000007899 I 0.000
ZBTB37 Equus caballus ENSECAG00000013585 I 0.000
Zbtb37 Dipodomys ordii ENSDORG00000008483 I 0.000
ZBTB37 Dasypus novemcinctus ENSDNOG00000007085 I 0.000
zbtb37 Danio rerio ENSDARG00000042689 I 0.000
ENSCSAG00000011813 Chlorocebus sabaeus ENSCSAG00000011813 I 0.000
ZBTB37 Cavia porcellus ENSCPOG00000004346 I 0.000
ZBTB37 Callithrix jacchus ENSCJAG00000009215 I 0.000
ZBTB37 Choloepus hoffmanni ENSCHOG00000007975 I 0.000
ZBTB37 Canis familiaris ENSCAFG00000014502 I 0.000
ZBTB37 Bos taurus ENSBTAG00000004361 I 0.000
ENSAPLG00000004883 Anas platyrhynchos ENSAPLG00000004883 I 0.000
ENSAMXG00000018035 Astyanax mexicanus ENSAMXG00000018035 I 0.000
ENSAMEG00000015639 Ailuropoda melanoleuca ENSAMEG00000015639 I 0.000
ENSFALG00000002979 Ficedula albicollis ENSFALG00000002979 I 0.000
ZBTB37 Felis catus ENSFCAG00000026634 I 0.000
zbtb37 Gasterosteus aculeatus ENSGACG00000013541 I 0.000
ENSNLEG00000015319 Nomascus leucogenys ENSNLEG00000015319 I 0.000
Zbtb37 Mus musculus ENSMUSG00000043467 I 0.000
ENSMPUG00000004728 Mustela putorius furo ENSMPUG00000004728 I 0.000
ZBTB37 Monodelphis domestica ENSMODG00000004228 I 0.000
ZBTB37 Macaca mulatta ENSMMUG00000022801 I 0.000
ZBTB37 Myotis lucifugus ENSMLUG00000011082 I 0.000
ZBTB37 Microcebus murinus ENSMICG00000002978 I 0.000
ZBTB37 Meleagris gallopavo ENSMGAG00000001976 I 0.000
ENSMEUG00000007312 Macropus eugenii ENSMEUG00000007312 I 0.000
ENSLOCG00000000232 Lepisosteus oculatus ENSLOCG00000000232 I 0.000
ZBTB37 Loxodonta africana ENSLAFG00000004363 I 0.000
ENSLACG00000016612 Latimeria chalumnae ENSLACG00000016612 I 0.000
ENSGMOG00000013329 Gadus morhua ENSGMOG00000013329 I 0.000
ZBTB37 Gorilla gorilla ENSGGOG00000000324 I 0.000
ZBTB37 Gallus gallus ENSGALG00000004597 I 0.000
ZBTB37 Anolis carolinensis ENSACAG00000015410 I 0.000