Ciclev10021174m.g (Citrus clementina)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Ciclev10021174m.g T356041_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY48
M02565_2.00
Arabidopsis thaliana
NNVGTCADNN

NNHTGACBNN
PBM
Weirauch et al.(2014)
pTH7552
0.866 0.810
WRKY8
M02564_2.00
Arabidopsis thaliana
NRGTCAAHN

NDTTGACYN
PBM
Weirauch et al.(2014)
pTH7554
0.864 0.828
WRKY28
M07406_2.00
Arabidopsis thaliana
HAAAGTCAAMNNH

DNNKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY28_col_a
0.864 0.828
WRKY28
M07407_2.00
Arabidopsis thaliana
VAAAGTCAAMG

CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY28_colamp_a
0.864 0.828
WRKY8
M07428_2.00
Arabidopsis thaliana
NAAAAGTCAACRNHW

WDNYGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY8_colamp_a
0.864 0.828
WRKY8
M07429_2.00
Arabidopsis thaliana
NNVAAAGTCAACRNH

DNYGTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY8_col
0.864 0.828
WRKY23
M02556_2.00
Arabidopsis thaliana
RGTCAACG

CGTTGACY
PBM
Weirauch et al.(2014)
pTH7387
0.862 0.879
WRKY23
M01089_2.00
Arabidopsis thaliana
NRGTCAAM

KTTGACYN
PBM
Sullivan et al.(2014)
pTH7671
0.862 0.879
WRKY57
M02547_2.00
Arabidopsis thaliana
NNRGTCAAHN

NDTTGACYNN
PBM
Weirauch et al.(2014)
pTH7917
0.862 0.828
WRKY71
M07374_2.00
Arabidopsis thaliana
HAAAGTCAAMN

NKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY71_col_a
0.861 0.845
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN

NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.842 0.672
WRKY14
M00731_2.00
Arabidopsis thaliana
NRGTCAAMNN

NNKTTGACYN
PBM
Chang et al.(2013)
pTH7570
0.837 0.603
WRKY14
M07375_2.00
Arabidopsis thaliana
NAAAGTCAACGNN

NNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_col_a
0.837 0.603
WRKY14
M07376_2.00
Arabidopsis thaliana
NAAAGTCAACGNH

DNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_colamp_a
0.837 0.603
WRKY27
M02566_2.00
Arabidopsis thaliana
NNGTCHDNN

NNHDGACNN
PBM
Weirauch et al.(2014)
pTH8188
0.834 0.569
WRKY27
M07430_2.00
Arabidopsis thaliana
MAAAGTCAACKNH

DNMGTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY27_col_a
0.834 0.569
WRKY27
M07431_2.00
Arabidopsis thaliana
HAAAGTCAACKNH

DNMGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY27_colamp_a
0.834 0.569
WRKY21
M02553_2.00
Arabidopsis thaliana
NNRGTCAAMN

NKTTGACYNN
PBM
Weirauch et al.(2014)
pTH7422
0.833 0.552
WRKY21
M07389_2.00
Arabidopsis thaliana
HAAAGTCAACNNH

DNNGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a
0.833 0.552
WRKY21
M07390_2.00
Arabidopsis thaliana
HAAAGTCAACK

MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_col
0.833 0.552
WRKY65
M07372_2.00
Arabidopsis thaliana
NWWAGTCAACG

CGTTGACTWWN
Dap-seq
OMalley et al.(2016)
WRKY65_col_a
0.832 0.552
WRKY65
M07373_2.00
Arabidopsis thaliana
NAAAGTCAACGN

NCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY65_colamp_a
0.832 0.552
WRKY75
M02562_2.00
Arabidopsis thaliana
NRGTCAAM

KTTGACYN
PBM
Weirauch et al.(2014)
pTH8821
0.831 0.707
WRKY75
M07420_2.00
Arabidopsis thaliana
NAAAGTCAACGNH

DNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY75_col_a
0.831 0.707
WRKY75
M07421_2.00
Arabidopsis thaliana
VAAAGTCAACRNH

DNYGTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY75_colamp_a
0.831 0.707
WRKY45
M00899_2.00
Arabidopsis thaliana
NNRGTCAAMGN

NCKTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY45
0.829 0.655
WRKY45
M07397_2.00
Arabidopsis thaliana
NAAAAGTCAAMD

HKTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY45_col_a
0.829 0.655
WRKY45
M07398_2.00
Arabidopsis thaliana
MAAAGTCAAMV

BKTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY45_colamp_a
0.829 0.655
WRKY22
M02557_2.00
Arabidopsis thaliana
NNNKTMHDNN

NNHDKAMNNN
PBM
Weirauch et al.(2014)
pTH7320
0.824 0.517
WRKY22
M07400_2.00
Arabidopsis thaliana
AAAAGTCAACKNH

DNMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY22_colamp_a
0.824 0.517
WRKY22
M07401_2.00
Arabidopsis thaliana
NAAAGTCAACKNH

DNMGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY22_col
0.824 0.517
WRKY43
M02555_2.00
Arabidopsis thaliana
NRGTCAAHNN

NNDTTGACYN
PBM
Weirauch et al.(2014)
pTH7373
0.822 0.707
WRKY43
M07393_2.00
Arabidopsis thaliana
NNAAAGTCAACGNN

NNCGTTGACTTTNN
Dap-seq
OMalley et al.(2016)
WRKY43_col_a
0.822 0.707
WRKY43
M07394_2.00
Arabidopsis thaliana
NNNNAAAGTCAACGN

NCGTTGACTTTNNNN
Dap-seq
OMalley et al.(2016)
WRKY43_colamp_a
0.822 0.707
Q40828_PETCR
M11467_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY_Q2
0.820 0.534
WRKY24
M07426_2.00
Arabidopsis thaliana
NNNAWAGTCAACGN

NCGTTGACTWTNNN
Dap-seq
OMalley et al.(2016)
WRKY24_col_a
0.819 0.707
WRKY24
M07427_2.00
Arabidopsis thaliana
NAWAGTCAACGNH

DNCGTTGACTWTN
Dap-seq
OMalley et al.(2016)
WRKY24_colamp_a
0.819 0.707
WRKY15
M02549_2.00
Arabidopsis thaliana
NRGTCAAMNN

NNKTTGACYN
PBM
Weirauch et al.(2014)
pTH7602
0.819 0.552
WRKY15
M07383_2.00
Arabidopsis thaliana
AAAAGTCAACKN

NMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY15_colamp_a
0.819 0.552
WRKY15
M07384_2.00
Arabidopsis thaliana
NWAAGTCAACB

VGTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY15_col_b
0.819 0.552
WRKY11
M02559_2.00
Arabidopsis thaliana
NDGTCAAHNN

NNDTTGACHN
PBM
Weirauch et al.(2014)
pTH8091
0.819 0.517
WRKY11
M07415_2.00
Arabidopsis thaliana
NHAAAGTCAACBNH

DNVGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY11_col_a
0.819 0.517
WRKY11
M11464_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY11_Q2
0.819 0.517
WRKY29
M02558_2.00
Arabidopsis thaliana
NNNGTCHDNN

NNHDGACNNN
PBM
Weirauch et al.(2014)
pTH9604
0.818 0.517
WRKY29
M07410_2.00
Arabidopsis thaliana
HAAAGTCAACK

MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY29_col_a
0.818 0.517
WRKY29
M07411_2.00
Arabidopsis thaliana
HWWAGTCAAMDNN

NNHKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY29_colamp_a
0.818 0.517
WRKY17
M02550_2.00
Arabidopsis thaliana
NNDGTCAAHN

NDTTGACHNN
PBM
Weirauch et al.(2014)
pTH8088
0.815 0.500
WRKY17
M07385_2.00
Arabidopsis thaliana
NHAAAGTCAACRNN

NNYGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY17_col_a
0.815 0.500
WRKY17
M07386_2.00
Arabidopsis thaliana
NMAAAGTCAACGN

NCGTTGACTTTKN
Dap-seq
OMalley et al.(2016)
WRKY17_colamp_a
0.815 0.500
WRKY40
M02548_2.00
Arabidopsis thaliana
NRGTCAWN

NWTGACYN
PBM
Weirauch et al.(2014)
pTH8398
0.814 0.621
WRKY40
M07379_2.00
Arabidopsis thaliana
NNNAAAGTCAAVR

YBTTGACTTTNNN
Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a
0.814 0.621
WRKY40
M07380_2.00
Arabidopsis thaliana
NNVAAAGTCAAVRNH

DNYBTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY40_col
0.814 0.621
WRKY40
M08180_2.00
Arabidopsis thaliana
NNAGTCAANN

NNTTGACTNN
ChIP-seq
Mathelier et al.(2014)
MA1085.2
0.814 0.621
WRKY12
M00898_2.00
Arabidopsis thaliana
NHGGTCAACNN

NNGTTGACCDN
PBM
Franco-Zorrilla et al.(2014)
WRKY12
0.814 0.672
WRKY50
M07424_2.00
Arabidopsis thaliana
NNAAAAGTCAAMN

NKTTGACTTTTNN
Dap-seq
OMalley et al.(2016)
WRKY50_col_a
0.812 0.638
WRKY50
M07425_2.00
Arabidopsis thaliana
NWAAGTCAANN

NNTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a
0.812 0.638
WRKY7
M07412_2.00
Arabidopsis thaliana
NNDDDNNNNMAAAGTCAACGV

BCGTTGACTTTKNNNNHHHNN
Dap-seq
OMalley et al.(2016)
WRKY7_colamp_a
0.812 0.517
WRKY7
M07413_2.00
Arabidopsis thaliana
NAAAAGTCAACKNN

NNMGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY7_col
0.812 0.517
PK25870.1
M01325_2.00
Cannabis sativa
NRGTCAAM

KTTGACYN
PBM
Lambert et al.(2019)
pTH10156
0.812 0.638
WRKY59
M07382_2.00
Arabidopsis thaliana
NDWWAGTCAAMN

NKTTGACTWWHN
Dap-seq
OMalley et al.(2016)
WRKY59_col_a
0.811 0.586
fgenesh1_pg.C_Chr_11.0001000193
M02570_2.00
Ostreococcus tauri
NRGTCARNN

NNYTGACYN
PBM
Weirauch et al.(2014)
pTH9432
0.808 0.552
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10021174m WRKY 169 226

Links

Other WRKY family TFs
Other Citrus clementina TFs

2240 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
DREB1D Arabidopsis thaliana AT5G51990 D 0.000
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.000
Eucgr.A02825 Eucalyptus grandis Eucgr.A02825 I 0.000
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.000
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.000
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.000
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.000
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.000
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.000
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.000
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.000
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.000
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.000
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.000
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.000
SapurV1A.0490s0260 Salix purpurea SapurV1A.0490s0260 I 0.000
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.000
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.000
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.000
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.000
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.000
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.000
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I 0.000
Eucgr.A02830 Eucalyptus grandis Eucgr.A02830 I 0.000
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.000
mgf026642m Mimulus guttatus mgf026642m I 0.000
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.000
POPTR_0014s05500 Populus trichocarpa POPTR_0014s05500 I 0.000
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.000
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.000
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.000
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.000
Bra028290 Brassica rapa Bra028290 I 0.000
Bra010460 Brassica rapa Bra010460 I 0.000
Bo9g104770 Brassica oleracea Bo9g104770 I 0.000
Bo8g050800 Brassica oleracea Bo8g050800 I 0.000
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.000
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.000
mgf022408m Mimulus guttatus mgf022408m I 0.000
mgf018934m Mimulus guttatus mgf018934m I 0.000
mgf018631m Mimulus guttatus mgf018631m I 0.000
mgf016974m Mimulus guttatus mgf016974m I 0.000
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.000
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.000
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.000
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.000
Cla006315 Citrullus lanatus Cla006315 I 0.000
Cla002362 Citrullus lanatus Cla002362 I 0.000
AMTR_s00069p00141520 Amborella trichopoda AMTR_s00069p00141520 I 0.000