CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_11.70
(
Carica papaya
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
evm.TU.supercontig_11.70
T356145_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY24
M07426_2.00
Arabidopsis thaliana
NNNAWAGTCAACGN
NCGTTGACTWTNNN
Dap-seq
OMalley et al.(2016)
WRKY24_col_a
0.809
0.698
WRKY24
M07427_2.00
Arabidopsis thaliana
NAWAGTCAACGNH
DNCGTTGACTWTN
Dap-seq
OMalley et al.(2016)
WRKY24_colamp_a
0.809
0.698
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_11.70
WRKY
87
139
KRKGGSSRMKKATRPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHP
Links
Other
WRKY
family TFs
Other
Carica papaya
TFs
124 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy