CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_184.33
(
Carica papaya
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
evm.TU.supercontig_184.33
T356162_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY22
M02557_2.00
Arabidopsis thaliana
NNNKTMHDNN
NNHDKAMNNN
PBM
Weirauch et al.(2014)
pTH7320
0.811
0.787
WRKY22
M07400_2.00
Arabidopsis thaliana
AAAAGTCAACKNH
DNMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY22_colamp_a
0.811
0.787
WRKY22
M07401_2.00
Arabidopsis thaliana
NAAAGTCAACKNH
DNMGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY22_col
0.811
0.787
WRKY65
M07372_2.00
Arabidopsis thaliana
NWWAGTCAACG
CGTTGACTWWN
Dap-seq
OMalley et al.(2016)
WRKY65_col_a
0.809
0.660
WRKY65
M07373_2.00
Arabidopsis thaliana
NAAAGTCAACGN
NCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY65_colamp_a
0.809
0.660
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_184.33
WRKY
115
165
TAANSHTPRSKRRGYYRCSSSKGCLARKQVERNRSDPTIFIVTYTAEHNHP
Links
Other
WRKY
family TFs
Other
Carica papaya
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA18G47300
Glycine max
GLYMA18G47300
I
0.818
MTR_7g079040
Medicago truncatula
MTR_7g079040
I
0.818
Ca_06167
Cicer arietinum
Ca_06167
I
0.818
chr1.LjT16J16.70.nd
Lotus japonicus
chr1.LjT16J16.70.nd
I
0.818
GLYMA09G39040
Glycine max
GLYMA09G39040
I
0.818
Ca_17759
Cicer arietinum
Ca_17759
I
0.818
Bo2g098820
Brassica oleracea
Bo2g098820
N
0.817
PGSC0003DMG400045376
Solanum tuberosum
PGSC0003DMG400045376
N
0.816
MTR_8g028565
Medicago truncatula
MTR_8g028565
I
0.816
Bra037368
Brassica rapa
Bra037368
I
0.815
Thhalv10028843m.g
Eutrema salsugineum
Thhalv10028843m.g
I
0.815
PRUPE_ppa007745mg
Prunus persica
PRUPE_ppa007745mg
I
0.815
Pm018219
Prunus mume
Pm018219
I
0.815
TCM_005261
Theobroma cacao
TCM_005261
I
0.815
MDP0000602139
Malus domestica
MDP0000602139
I
0.815
MTR_8g098945
Medicago truncatula
MTR_8g098945
I
0.815
Bo9g003610
Brassica oleracea
Bo9g003610
I
0.815
MDP0000909869
Malus domestica
MDP0000909869
I
0.815
GLYMA16G03570
Glycine max
GLYMA16G03570
I
0.815
SapurV1A.0029s0340
Salix purpurea
SapurV1A.0029s0340
I
0.815
Cla021523
Citrullus lanatus
Cla021523
I
0.814
PK09209.1
Cannabis sativa
PK09209.1
I
0.814
SapurV1A.0099s0300
Salix purpurea
SapurV1A.0099s0300
I
0.814
cassava40183.m1
Manihot esculenta
cassava40183.m1
I
0.814
cassava46457.m1
Manihot esculenta
cassava46457.m1
I
0.814
WRKY22
Vitis vinifera
VIT_15s0046g02190
I
0.814
Ciclev10020943m.g
Citrus clementina
Ciclev10020943m.g
I
0.814
Cucsa.258700
Cucumis sativus
Cucsa.258700
I
0.814
orange1.1g019126m.g
Citrus sinensis
orange1.1g019126m.g
I
0.814
30174.m008663
Ricinus communis
30174.m008663
I
0.814
POPTR_0002s16590
Populus trichocarpa
POPTR_0002s16590
I
0.814
POPTR_0014s08600
Populus trichocarpa
POPTR_0014s08600
I
0.814
Eucgr.E00098
Eucalyptus grandis
Eucgr.E00098
I
0.813
LjSGA_058050.1
Lotus japonicus
LjSGA_058050.1
I
0.812
Solyc10g011910.2
Solanum lycopersicum
Solyc10g011910.2
I
0.812
PGSC0003DMG400000064
Solanum tuberosum
PGSC0003DMG400000064
I
0.812
Solyc01g095100.2
Solanum lycopersicum
Solyc01g095100.2
I
0.812
Carubv10001446m.g
Capsella rubella
Carubv10001446m.g
I
0.811
WRKY22
Arabidopsis lyrata
fgenesh2_kg.6__3581__AT4G01250.1
I
0.811
Bostr.10064s0007
Boechera stricta
Bostr.10064s0007
I
0.811
WRKY22
Arabidopsis thaliana
AT4G01250
D
0.811
cassava39274.m1
Manihot esculenta
cassava39274.m1
I
0.811
mgf017547m
Mimulus guttatus
mgf017547m
I
0.810
Bo3g143900
Brassica oleracea
Bo3g143900
I
0.810
SELMODRAFT_77979
Selaginella moellendorffii
SELMODRAFT_77979
I
0.810
SELMODRAFT_129832
Selaginella moellendorffii
SELMODRAFT_129832
I
0.810
Bra010839
Brassica rapa
Bra010839
I
0.810
Pavir.Eb03138
Panicum virgatum
Pavir.Eb03138
I
0.809
Pavir.Ea02735
Panicum virgatum
Pavir.Ea02735
I
0.809
GLYMA05G37390
Glycine max
GLYMA05G37390
I
0.809
GLYMA08G02160
Glycine max
GLYMA08G02160
I
0.809
Bostr.15697s0224
Boechera stricta
Bostr.15697s0224
I
0.809
WRKY65
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1002596
I
0.809
Bo5g058590
Brassica oleracea
Bo5g058590
I
0.809
Bra032300
Brassica rapa
Bra032300
I
0.809
WRKY65
Arabidopsis thaliana
AT1G29280
D
0.809
PK12935.1
Cannabis sativa
PK12935.1
I
0.809
Cagra.3517s0048
Capsella grandiflora
Cagra.3517s0048
I
0.809
Carubv10010013m.g
Capsella rubella
Carubv10010013m.g
I
0.809
Lus10007907.g
Linum usitatissimum
Lus10007907.g
I
0.808
Cucsa.212870
Cucumis sativus
Cucsa.212870
I
0.808
Eucgr.D02324
Eucalyptus grandis
Eucgr.D02324
I
0.808
Lus10036399.g
Linum usitatissimum
Lus10036399.g
I
0.808