gene13547-v1.0-hybrid (Fragaria vesca)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 gene13547-v1.0-hybrid T356210_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN

NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.836 0.661
WRKY46
M07395_2.00
Arabidopsis thaliana
VAAAGTCAAMG

CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY46_col_a
0.814 0.593
WRKY46
M07396_2.00
Arabidopsis thaliana
HRAAGTCAACG

CGTTGACTTYD
Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a
0.814 0.593
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna13547.1-v1.0-hybrid WRKY 148 208

Links

Other WRKY family TFs
Other Fragaria vesca TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GSPATT00013939001 Paramecium tetraurelia GSPATT00013939001 I 0.000
GSPATT00017807001 Paramecium tetraurelia GSPATT00017807001 I 0.000
GSPATT00017948001 Paramecium tetraurelia GSPATT00017948001 I 0.000
GSPATT00018082001 Paramecium tetraurelia GSPATT00018082001 D 0.000
GSPATT00020546001 Paramecium tetraurelia GSPATT00020546001 I 0.000
GSPATT00022077001 Paramecium tetraurelia GSPATT00022077001 I 0.000
GSPATT00027320001 Paramecium tetraurelia GSPATT00027320001 I 0.000
GSPATT00028442001 Paramecium tetraurelia GSPATT00028442001 I 0.000
GSPATT00028963001 Paramecium tetraurelia GSPATT00028963001 I 0.000
GSPATT00031089001 Paramecium tetraurelia GSPATT00031089001 I 0.000
GSPATT00032613001 Paramecium tetraurelia GSPATT00032613001 N 0.000
GSPATT00033221001 Paramecium tetraurelia GSPATT00033221001 I 0.000
GSPATT00039180001 Paramecium tetraurelia GSPATT00039180001 I 0.000