gene15421-v1.0-hybrid (Fragaria vesca)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 gene15421-v1.0-hybrid T356218_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY50
M07424_2.00
Arabidopsis thaliana
NNAAAAGTCAAMN

NKTTGACTTTTNN
Dap-seq
OMalley et al.(2016)
WRKY50_col_a
0.834 0.774
WRKY50
M07425_2.00
Arabidopsis thaliana
NWAAGTCAANN

NNTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a
0.834 0.774
PK25870.1
M01325_2.00
Cannabis sativa
NRGTCAAM

KTTGACYN
PBM
Lambert et al.(2019)
pTH10156
0.823 0.755
WRKY51
M02568_2.00
Arabidopsis thaliana
NNRGTCAANN

NNTTGACYNN
PBM
Weirauch et al.(2014)
pTH7478
0.811 0.698
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna15421.1-v1.0-hybrid WRKY 96 148

Links

Other WRKY family TFs
Other Fragaria vesca TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
WRKY50 Arabidopsis thaliana AT5G26170 D 0.834
WRKY51 Arabidopsis thaliana AT5G64810 D 0.811
PK25870.1 Cannabis sativa PK25870.1 D 0.823
Cagra.0998s0013 Capsella grandiflora Cagra.0998s0013 I 0.840
28644.m000915 Ricinus communis 28644.m000915 I 0.809
Pm005548 Prunus mume Pm005548 I 0.839
Pm001825 Prunus mume Pm001825 I 0.814
Cla022318 Citrullus lanatus Cla022318 I 0.839
Ca_09134 Cicer arietinum Ca_09134 I 0.832
VIT_07s0031g01710 Vitis vinifera VIT_07s0031g01710 I 0.824
VIT_04s0069g00970 Vitis vinifera VIT_04s0069g00970 I 0.830
VIT_04s0008g01470 Vitis vinifera VIT_04s0008g01470 I 0.839
TRIUR3_33662 Triticum urartu TRIUR3_33662 I 0.820
29739.m003586 Ricinus communis 29739.m003586 I 0.834
29771.m000072 Ricinus communis 29771.m000072 I 0.820
cassava10657.m1 Manihot esculenta cassava10657.m1 I 0.832
Bostr.29827s0201 Boechera stricta Bostr.29827s0201 I 0.840
Bostr.0568s0314 Boechera stricta Bostr.0568s0314 I 0.811
Aquca_014_00461 Aquilegia coerulea Aquca_014_00461 I 0.812
mgf026356m Mimulus guttatus mgf026356m I 0.836
Cucsa.250350 Cucumis sativus Cucsa.250350 I 0.820
Cucsa.101530 Cucumis sativus Cucsa.101530 I 0.815
cassava28704.m1 Manihot esculenta cassava28704.m1 I 0.835
cassava14063.valid.m1 Manihot esculenta cassava14063.valid.m1 I 0.824
cassava14062.valid.m1 Manihot esculenta cassava14062.valid.m1 I 0.824
TRIUR3_29978 Triticum urartu TRIUR3_29978 I 0.827
TRIUR3_24021 Triticum urartu TRIUR3_24021 I 0.819
TRIUR3_01979 Triticum urartu TRIUR3_01979 I 0.828
Solyc04g051690.2 Solanum lycopersicum Solyc04g051690.2 I 0.833
Si023279m.g Setaria italica Si023279m.g I 0.826
Si023194m.g Setaria italica Si023194m.g I 0.826
Si004464m.g Setaria italica Si004464m.g I 0.826
Si002862m.g Setaria italica Si002862m.g I 0.814
Si002621m.g Setaria italica Si002621m.g I 0.823
Sb09g026830 Sorghum bicolor Sb09g026830 I 0.826
Sb09g005700 Sorghum bicolor Sb09g005700 I 0.826
Sb03g032800 Sorghum bicolor Sb03g032800 I 0.821
Solyc08g062490.2 Solanum lycopersicum Solyc08g062490.2 I 0.833
TCM_001265 Theobroma cacao TCM_001265 I 0.821
TCM_035897 Theobroma cacao TCM_035897 I 0.820
Traes_4AL_C2A825B6D Triticum aestivum Traes_4AL_C2A825B6D I 0.812
Traes_3DL_DF0D3F3FE Triticum aestivum Traes_3DL_DF0D3F3FE I 0.820
TRAES3BF267200010CFD_g Triticum aestivum TRAES3BF267200010CFD_g I 0.832
TRAES3BF111700140CFD_g Triticum aestivum TRAES3BF111700140CFD_g I 0.820
TRAES3BF066700160CFD_g Triticum aestivum TRAES3BF066700160CFD_g I 0.813
Traes_1DL_D550418641 Triticum aestivum Traes_1DL_D550418641 I 0.828
Traes_1AS_1432A2F79 Triticum aestivum Traes_1AS_1432A2F79 I 0.827
Traes_1AL_9ADA7A031 Triticum aestivum Traes_1AL_9ADA7A031 I 0.828
TCM_037343 Theobroma cacao TCM_037343 I 0.838
Sb03g026170 Sorghum bicolor Sb03g026170 I 0.819
Cagra.2438s0022 Capsella grandiflora Cagra.2438s0022 I 0.811
PDK_20s1746561g001 Phoenix dactylifera PDK_20s1746561g001 I 0.822
Pavir.J05732 Panicum virgatum Pavir.J05732 I 0.826
Pavir.J03284 Panicum virgatum Pavir.J03284 I 0.826
Pavir.Eb02766 Panicum virgatum Pavir.Eb02766 I 0.822
Pavir.Eb02454 Panicum virgatum Pavir.Eb02454 I 0.816
Pavir.Ea02619 Panicum virgatum Pavir.Ea02619 I 0.826
Pavir.Ea02041 Panicum virgatum Pavir.Ea02041 I 0.816
Pavir.Ea00274 Panicum virgatum Pavir.Ea00274 I 0.823
Pavir.Ca01747 Panicum virgatum Pavir.Ca01747 I 0.826
Pavir.Ca01028 Panicum virgatum Pavir.Ca01028 I 0.826
Pavir.J08526 Panicum virgatum Pavir.J08526 I 0.823
SapurV1A.0318s0110 Salix purpurea SapurV1A.0318s0110 I 0.809
SapurV1A.0594s0120 Salix purpurea SapurV1A.0594s0120 I 0.823
PDK_20s1512971g002 Phoenix dactylifera PDK_20s1512971g002 I 0.820
PDK_20s1384091g002 Phoenix dactylifera PDK_20s1384091g002 I 0.811
PDK_20s1331611g001 Phoenix dactylifera PDK_20s1331611g001 I 0.812
LjSGA_012799.2 Lotus japonicus LjSGA_012799.2 I 0.835
chr1.CM0133.390.nc Lotus japonicus chr1.CM0133.390.nc I 0.811
PK29640.1 Cannabis sativa PK29640.1 I 0.839
Thhalv10005029m.g Eutrema salsugineum Thhalv10005029m.g I 0.835
Thhalv10004930m.g Eutrema salsugineum Thhalv10004930m.g I 0.810
SapurV1A.1151s0090 Salix purpurea SapurV1A.1151s0090 I 0.830
orange1.1g031482m.g Citrus sinensis orange1.1g031482m.g I 0.840
orange1.1g029257m.g Citrus sinensis orange1.1g029257m.g I 0.824
MDP0000480547 Malus domestica MDP0000480547 I 0.821
gene22024-v1.0-hybrid Fragaria vesca gene22024-v1.0-hybrid I 0.818
evm.TU.supercontig_919.2 Carica papaya evm.TU.supercontig_919.2 I 0.819
evm.TU.supercontig_126.49 Carica papaya evm.TU.supercontig_126.49 I 0.840
Eucgr.I00317 Eucalyptus grandis Eucgr.I00317 I 0.820
Eucgr.I00316 Eucalyptus grandis Eucgr.I00316 I 0.825
Eucgr.C00675 Eucalyptus grandis Eucgr.C00675 I 0.839
Ciclev10026733m.g Citrus clementina Ciclev10026733m.g I 0.824
Ciclev10009761m.g Citrus clementina Ciclev10009761m.g I 0.840
Carubv10027178m.g Capsella rubella Carubv10027178m.g I 0.811
Gorai.001G021500 Gossypium raimondii Gorai.001G021500 I 0.837
Gorai.003G047800 Gossypium raimondii Gorai.003G047800 I 0.818
Gorai.007G245200 Gossypium raimondii Gorai.007G245200 I 0.821
MDP0000299555 Malus domestica MDP0000299555 I 0.825
MDP0000253189 Malus domestica MDP0000253189 I 0.822
MDP0000121669 Malus domestica MDP0000121669 I 0.825
Lus10036624.g Linum usitatissimum Lus10036624.g I 0.811
Lus10035841.g Linum usitatissimum Lus10035841.g I 0.811
Lus10006848.g Linum usitatissimum Lus10006848.g I 0.830
Gorai.011G114200 Gossypium raimondii Gorai.011G114200 I 0.819
Gorai.010G131300 Gossypium raimondii Gorai.010G131300 I 0.814
Gorai.010G098000 Gossypium raimondii Gorai.010G098000 I 0.825
Carubv10002099m.g Capsella rubella Carubv10002099m.g I 0.840
Sb03g003360 Sorghum bicolor Sb03g003360 I 0.822
MLOC_81131 Hordeum vulgare MLOC_81131 I 0.828
GRMZM2G475984 Zea mays GRMZM2G475984 I 0.823
GRMZM2G163054 Zea mays GRMZM2G163054 I 0.822
GRMZM2G137802 Zea mays GRMZM2G137802 I 0.825
GRMZM2G101405 Zea mays GRMZM2G101405 I 0.825
GRMZM2G057116 Zea mays GRMZM2G057116 I 0.826
GLYMA17G34210 Glycine max GLYMA17G34210 I 0.836
GLYMA14G11440 Glycine max GLYMA14G11440 I 0.825
GLYMA08G15050 Glycine max GLYMA08G15050 I 0.808
GLYMA06G15220 Glycine max GLYMA06G15220 I 0.813
GLYMA06G05721 Glycine max GLYMA06G05721 I 0.833
GRMZM2G516301 Zea mays GRMZM2G516301 I 0.823
GRMZM5G863420 Zea mays GRMZM5G863420 I 0.826
MLOC_12079 Hordeum vulgare MLOC_12079 I 0.827
MLOC_10264 Hordeum vulgare MLOC_10264 I 0.828
LPERR05G19900 Leersia perrieri LPERR05G19900 I 0.826
LPERR05G04920 Leersia perrieri LPERR05G04920 I 0.822
LPERR01G24650 Leersia perrieri LPERR01G24650 I 0.824
LPERR01G17790 Leersia perrieri LPERR01G17790 I 0.819
LPERR01G05270 Leersia perrieri LPERR01G05270 I 0.817
GSMUA_Achr7G23980_001 Musa acuminata GSMUA_Achr7G23980_001 I 0.812
GSMUA_Achr7G09680_001 Musa acuminata GSMUA_Achr7G09680_001 I 0.826
GSMUA_Achr3G20450_001 Musa acuminata GSMUA_Achr3G20450_001 I 0.828
GLYMA04G39650 Glycine max GLYMA04G39650 I 0.814
GLYMA04G05700 Glycine max GLYMA04G05700 I 0.839
Bra009885 Brassica rapa Bra009885 I 0.841
Bo9g018440 Brassica oleracea Bo9g018440 I 0.809
Bo9g011080 Brassica oleracea Bo9g011080 I 0.841
Bo7g095430 Brassica oleracea Bo7g095430 I 0.837
Bo2g155960 Brassica oleracea Bo2g155960 I 0.833
BGIOSGA020266 Oryza indica BGIOSGA020266 I 0.826
BGIOSGA018676 Oryza indica BGIOSGA018676 I 0.822
BGIOSGA003851 Oryza indica BGIOSGA003851 I 0.819
BGIOSGA002237 Oryza indica BGIOSGA002237 I 0.823
BGIOSGA000921 Oryza indica BGIOSGA000921 I 0.825
Bra020546 Brassica rapa Bra020546 I 0.833
Bra037796 Brassica rapa Bra037796 I 0.809
WRKY51 Arabidopsis lyrata fgenesh2_kg.8__2513__AT5G64810.1 I 0.811
WRKY50 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6002222 I 0.829
F775_52480 Aegilops tauschii F775_52480 I 0.828
F775_44085 Aegilops tauschii F775_44085 I 0.818
F775_27801 Aegilops tauschii F775_27801 I 0.814
F775_19446 Aegilops tauschii F775_19446 I 0.827
BRADI2G48090 Brachypodium distachyon BRADI2G48090 I 0.820
BRADI2G33540 Brachypodium distachyon BRADI2G33540 I 0.825
BRADI2G18530 Brachypodium distachyon BRADI2G18530 I 0.826
BRADI2G05510 Brachypodium distachyon BRADI2G05510 I 0.817
AMTR_s00078p00145410 Amborella trichopoda AMTR_s00078p00145410 I 0.821
MTR_1g015140 Medicago truncatula MTR_1g015140 I 0.834
PRUPE_ppa015480mg Prunus persica PRUPE_ppa015480mg I 0.823
ORUFI01G23500 Oryza rufipogon ORUFI01G23500 I 0.819
ORUFI01G06050 Oryza rufipogon ORUFI01G06050 I 0.823
ORGLA05G0050000 Oryza glaberrima ORGLA05G0050000 I 0.822
ORGLA01G0238400 Oryza glaberrima ORGLA01G0238400 I 0.825
ORGLA01G0052400 Oryza glaberrima ORGLA01G0052400 I 0.823
OPUNC05G21470 Oryza punctata OPUNC05G21470 I 0.826
OPUNC05G05190 Oryza punctata OPUNC05G05190 I 0.822
OPUNC01G28510 Oryza punctata OPUNC01G28510 I 0.825
OPUNC01G20950 Oryza punctata OPUNC01G20950 I 0.819
ORUFI01G31840 Oryza rufipogon ORUFI01G31840 I 0.825
ORUFI05G05890 Oryza rufipogon ORUFI05G05890 I 0.822
ORUFI05G25660 Oryza rufipogon ORUFI05G25660 I 0.826
POPTR_0007s06720 Populus trichocarpa POPTR_0007s06720 I 0.823
POPTR_0006s24050 Populus trichocarpa POPTR_0006s24050 I 0.837
POPTR_0005s08720 Populus trichocarpa POPTR_0005s08720 I 0.820
PGSC0003DMG401031196 Solanum tuberosum PGSC0003DMG401031196 I 0.828
OS05G0537100 Oryza sativa OS05G0537100 I 0.826
OS05G0183100 Oryza sativa OS05G0183100 I 0.822
OS01G0714800 Oryza sativa OS01G0714800 I 0.825
OS01G0584900 Oryza sativa OS01G0584900 I 0.819
OS01G0186000 Oryza sativa OS01G0186000 I 0.823
OPUNC01G05450 Oryza punctata OPUNC01G05450 I 0.823
ONIVA05G24830 Oryza nivara ONIVA05G24830 I 0.826
ONIVA05G06030 Oryza nivara ONIVA05G06030 I 0.822
OGLUM01G06090 Oryza glumaepatula OGLUM01G06090 I 0.823
OBART05G24090 Oryza barthii OBART05G24090 I 0.826
OBART05G05560 Oryza barthii OBART05G05560 I 0.822
OBART01G28780 Oryza barthii OBART01G28780 I 0.825
OBART01G28750 Oryza barthii OBART01G28750 I 0.825
OBART01G20830 Oryza barthii OBART01G20830 I 0.819
OB05G31630 Oryza brachyantha OB05G31630 I 0.822
OB05G15280 Oryza brachyantha OB05G15280 I 0.822
OB01G37710 Oryza brachyantha OB01G37710 I 0.825
MTR_8g092010 Medicago truncatula MTR_8g092010 I 0.813
OGLUM01G24490 Oryza glumaepatula OGLUM01G24490 I 0.819
OGLUM01G32750 Oryza glumaepatula OGLUM01G32750 I 0.825
ONIVA01G23410 Oryza nivara ONIVA01G23410 I 0.819
ONIVA01G06360 Oryza nivara ONIVA01G06360 I 0.823
OMERI05G05240 Oryza meridionalis OMERI05G05240 I 0.822
OMERI01G26720 Oryza meridionalis OMERI01G26720 I 0.826
OMERI01G26280 Oryza meridionalis OMERI01G26280 I 0.825
OMERI01G18980 Oryza meridionalis OMERI01G18980 I 0.819
OMERI01G05840 Oryza meridionalis OMERI01G05840 I 0.823
OLONG_016272 Oryza longistaminata OLONG_016272 I 0.819
OGLUM05G05440 Oryza glumaepatula OGLUM05G05440 I 0.822
MTR_3g104750 Medicago truncatula MTR_3g104750 I 0.841
Traes_3AL_AB2BAE660 Triticum aestivum Traes_3AL_AB2BAE660 N 0.812