gene15421-v1.0-hybrid (Fragaria vesca)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 gene15421-v1.0-hybrid T356218_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY50
M07424_2.00
Arabidopsis thaliana
NNAAAAGTCAAMN

NKTTGACTTTTNN
Dap-seq
OMalley et al.(2016)
WRKY50_col_a
0.834 0.774
WRKY50
M07425_2.00
Arabidopsis thaliana
NWAAGTCAANN

NNTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a
0.834 0.774
PK25870.1
M01325_2.00
Cannabis sativa
NRGTCAAM

KTTGACYN
PBM
Lambert et al.(2019)
pTH10156
0.823 0.755
WRKY51
M02568_2.00
Arabidopsis thaliana
NNRGTCAANN

NNTTGACYNN
PBM
Weirauch et al.(2014)
pTH7478
0.811 0.698
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna15421.1-v1.0-hybrid WRKY 96 148

Links

Other WRKY family TFs
Other Fragaria vesca TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AB00861.1 Alternaria brassicicola AB00861.1 I 0.000
fgenesh1_pm.00129_#_214 Aspergillus carbonarius fgenesh1_pm.00129_#_214 I 0.000
CADAFLAG00002225 Aspergillus flavus CADAFLAG00002225 N 0.000
AFUA_1G03800 Aspergillus fumigatus CADAFUAG00009294 I 0.000
ANIA_10504 Aspergillus nidulans CADANIAG00004652 I 0.000
CADANGAG00014030 Aspergillus niger CADANGAG00014030 I 0.000
CADAORAG00001531 Aspergillus oryzae CADAORAG00001531 N 0.000
ATEG_03831 Aspergillus terreus CADATEAG00008906 I 0.000
COCMIDRAFT_5378 Bipolaris oryzae COCMIDRAFT_5378 I 0.000
COCSADRAFT_142075 Bipolaris sorokiniana COCSADRAFT_142075 I 0.000
COCVIDRAFT_97148 Bipolaris victoriae COCVIDRAFT_97148 I 0.000
COCCADRAFT_98777 Bipolaris zeicola COCCADRAFT_98777 I 0.000
PVAR5_1305 Byssochlamys spectabilis PVAR5_1305 N 0.000
A1O1_06649 Capronia coronata A1O1_06649 I 0.000
PV04_02129 Capronia semiimmersa PV04_02129 I 0.000
G647_09757 Cladophialophora carrionii G647_09757 I 0.000
PV07_02419 Cladophialophora immunda PV07_02419 I 0.000
A1O7_01941 Cladophialophora yegresii A1O7_01941 I 0.000
estExt_Genewise1Plus.C_270154 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_270154 I 0.000
HMPREF1541_07144 Cyphellophora europaea HMPREF1541_07144 I 0.000
A1O9_06866 Exophiala aquamarina A1O9_06866 I 0.000
HMPREF1120_04361 Exophiala dermatitidis HMPREF1120_04361 I 0.000
PV10_03597 Exophiala mesophila PV10_03597 N 0.000
PV06_07997 Exophiala oligosperma PV06_07997 I 0.000
PV08_03653 Exophiala spinifera PV08_03653 N 0.000
PV05_07659 Exophiala xenobiotica PV05_07659 I 0.000
HCBG_00529 Histoplasma capsulatum HCBG_00529 N 0.000
LEMA_P067510.1 Leptosphaeria maculans LEMA_P067510.1 I 0.000
NFIA_020870 Neosartorya fischeri CADNFIAG00001734 I 0.000
Pc16g08180 Penicillium chrysogenum Pc16g08180 I 0.000
PEX1_002120 Penicillium expansum PEX1_002120 I 0.000
PITC_030780 Penicillium italicum PITC_030780 I 0.000
PMAA_055120 Penicillium marneffei PMAA_055120 I 0.000
PCH_Pc16g08180 Penicillium rubens PCH_Pc16g08180 I 0.000
U727_00434000191 Penicillium solitum U727_00434000191 I 0.000
PTT_13784 Pyrenophora teres PTT_13784 I 0.000
PTRG_10316 Pyrenophora triticirepentis PTRG_10316 I 0.000
Z518_05417 Rhinocladiella mackenziei Z518_05417 I 0.000
SETTUDRAFT_19016 Setosphaeria turcica SETTUDRAFT_19016 I 0.000
PMAA_055120 Talaromyces marneffei PMAA_055120 I 0.000
TSTA_017770 Talaromyces stipitatus TSTA_017770 I 0.000
UREG_01815 Uncinocarpus reesii UREG_01815 I 0.000