Gorai.013G155500 (Gossypium raimondii)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Gorai.013G155500 T356367_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY20
M07414_2.00
Arabidopsis thaliana
HHHRGTCAAMGNH

DNCKTTGACYDDD
Dap-seq
OMalley et al.(2016)
WRKY20_col_a
0.891 0.957
Q40090_IPOBA
M11466_2.00
Ipomoea batatas Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SPF1_Q2
0.866 0.852
WRKY3
M07381_2.00
Arabidopsis thaliana
MAWAGTCAAMR

YKTTGACTWTK
Dap-seq
OMalley et al.(2016)
WRKY3_col_a
0.863 0.817
PK05432.1
M01324_2.00
Cannabis sativa
NNRGTCARH

DYTGACYNN
PBM
Lambert et al.(2019)
pTH11342
0.860 0.861
WRKY33
M02554_2.00
Arabidopsis thaliana
NNRGTCHDNN

NNHDGACYNN
PBM
Weirauch et al.(2014)
pTH8183
0.859 0.826
WRKY33
M07391_2.00
Arabidopsis thaliana
HWWAGTCAAMD

HKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY33_col_a
0.859 0.826
WRKY26
M07418_2.00
Arabidopsis thaliana
MWAAGTCAACGNH

DNCGTTGACTWWK
Dap-seq
OMalley et al.(2016)
WRKY26_col_a
0.858 0.774
WRKY26
M07419_2.00
Arabidopsis thaliana
HMWAGTCAAMR

YKTTGACTWKD
Dap-seq
OMalley et al.(2016)
WRKY26_colamp_a
0.858 0.774
WRKY2
M02567_2.00
Arabidopsis thaliana
BRGTCAAM

KTTGACYV
PBM
Weirauch et al.(2014)
pTH8832
0.857 0.826
WRKY25
M02552_2.00
Arabidopsis thaliana
YRGTCAAM

KTTGACYR
PBM
Weirauch et al.(2014)
pTH8810
0.843 0.704
WRKY25
M07387_2.00
Arabidopsis thaliana
HWWRGTCAAMR

YKTTGACYWWD
Dap-seq
OMalley et al.(2016)
WRKY25_col_a
0.843 0.704
WRKY25
M07388_2.00
Arabidopsis thaliana
NNNHWRGTCAACRNH

DNYGTTGACYWDNNN
Dap-seq
OMalley et al.(2016)
WRKY25_colamp_a
0.843 0.704
ZAP1
M02726_2.00
Arabidopsis thaliana
DRCKCGGTCAA

TTGACCGMGYH
SELEX
Mathelier et al.(2014)
MA0589.1
0.841 0.704
ZAP1
M11463_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ZAP1_01
0.841 0.704
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G155500.1 WRKY 215 271
Gorai.013G155500.1 WRKY 379 436
Gorai.013G155500.2 WRKY 200 256
Gorai.013G155500.2 WRKY 364 421
Gorai.013G155500.3 WRKY 215 271
Gorai.013G155500.3 WRKY 359 416
Gorai.013G155500.4 WRKY 59 115
Gorai.013G155500.4 WRKY 223 280
Gorai.013G155500.5 WRKY 59 115
Gorai.013G155500.5 WRKY 223 280

Links

Other WRKY family TFs
Other Gossypium raimondii TFs

787 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cla016588 Citrullus lanatus Cla016588 N 0.000
GSMUA_Achr8G24280_001 Musa acuminata GSMUA_Achr8G24280_001 N 0.000
PGSC0003DMG400016962 Solanum tuberosum PGSC0003DMG400016962 N 0.000
VIT_18s0001g01820 Vitis vinifera VIT_18s0001g01820 I 0.000