CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000260803
(
Malus domestica
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
MDP0000260803
T356544_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY2
M02567_2.00
Arabidopsis thaliana
BRGTCAAM
KTTGACYV
PBM
Weirauch et al.(2014)
pTH8832
0.809
0.544
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000260803
WRKY
113
169
DDGYHWRKYGQKSVKGNXYVRSYYRCTHPKCEVKRQVERKHSGQITDTIYFGEHEHS
MDP0000260803
WRKY
288
345
SDGYRWRKYGQKLVKGNPNPRSYYRCSNPGCPVRKHVERASHDSKVVIATYEGQHDHD
Links
Other
WRKY
family TFs
Other
Malus domestica
TFs
116 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000258212
Malus domestica
MDP0000258212
I
0.839
Pm015020
Prunus mume
Pm015020
I
0.823
MDP0000256105
Malus domestica
MDP0000256105
I
0.822
PRUPE_ppa004905mg
Prunus persica
PRUPE_ppa004905mg
I
0.821
cassava30780.valid.m1
Manihot esculenta
cassava30780.valid.m1
I
0.820
Ca_08975
Cicer arietinum
Ca_08975
I
0.819
gene21591-v1.0-hybrid
Fragaria vesca
gene21591-v1.0-hybrid
I
0.818
GLYMA14G01010
Glycine max
GLYMA14G01010
I
0.817
Gorai.001G192900
Gossypium raimondii
Gorai.001G192900
I
0.817
GLYMA02G47650
Glycine max
GLYMA02G47650
I
0.817
cassava8292.valid.m1
Manihot esculenta
cassava8292.valid.m1
I
0.816
SapurV1A.0054s0150
Salix purpurea
SapurV1A.0054s0150
I
0.816
POPTR_0014s16220
Populus trichocarpa
POPTR_0014s16220
I
0.816
Cla015922
Citrullus lanatus
Cla015922
I
0.816
GSMUA_Achr4G01600_001
Musa acuminata
GSMUA_Achr4G01600_001
I
0.816
Gorai.007G167100
Gossypium raimondii
Gorai.007G167100
I
0.816
29949.m000123
Ricinus communis
29949.m000123
I
0.815
GSMUA_Achr5G04150_001
Musa acuminata
GSMUA_Achr5G04150_001
I
0.815
SELMODRAFT_47103
Selaginella moellendorffii
SELMODRAFT_47103
I
0.815
SELMODRAFT_125080
Selaginella moellendorffii
SELMODRAFT_125080
I
0.815
POPTR_0002s22180
Populus trichocarpa
POPTR_0002s22180
I
0.815
Cla004503
Citrullus lanatus
Cla004503
I
0.815
GSMUA_Achr11G10010_001
Musa acuminata
GSMUA_Achr11G10010_001
I
0.815
PDK_20s1777781g001
Phoenix dactylifera
PDK_20s1777781g001
I
0.815
PK16045.1
Cannabis sativa
PK16045.1
I
0.815
Cla008232
Citrullus lanatus
Cla008232
I
0.814
AMTR_s00061p00050690
Amborella trichopoda
AMTR_s00061p00050690
I
0.814
Cucsa.111910
Cucumis sativus
Cucsa.111910
I
0.814
Cucsa.041700
Cucumis sativus
Cucsa.041700
I
0.814
PK20695.1
Cannabis sativa
PK20695.1
I
0.814
VIT_06s0004g07500
Vitis vinifera
VIT_06s0004g07500
I
0.813
MTR_3g031220
Medicago truncatula
MTR_3g031220
I
0.813
Lus10006368.g
Linum usitatissimum
Lus10006368.g
I
0.813
GSMUA_Achr6G03500_001
Musa acuminata
GSMUA_Achr6G03500_001
I
0.813
ZAP1
Vitis vinifera
VIT_12s0057g00550
I
0.813
Gorai.003G150700
Gossypium raimondii
Gorai.003G150700
I
0.812
gene28174-v1.0-hybrid
Fragaria vesca
gene28174-v1.0-hybrid
I
0.812
Ciclev10000654m.g
Citrus clementina
Ciclev10000654m.g
I
0.812
MDP0000179145
Malus domestica
MDP0000179145
N
0.812
MDP0000242596
Malus domestica
MDP0000242596
N
0.812
Pm000163
Prunus mume
Pm000163
I
0.812
Eucgr.B04010
Eucalyptus grandis
Eucgr.B04010
I
0.812
Eucgr.F01981
Eucalyptus grandis
Eucgr.F01981
I
0.812
TCM_002318
Theobroma cacao
TCM_002318
I
0.812
PRUPE_ppa003333mg
Prunus persica
PRUPE_ppa003333mg
I
0.812
MDP0000514115
Malus domestica
MDP0000514115
I
0.812
orange1.1g011483m.g
Citrus sinensis
orange1.1g011483m.g
I
0.812
Si021956m.g
Setaria italica
Si021956m.g
I
0.812
MDP0000507805
Malus domestica
MDP0000507805
I
0.812
TCM_042240
Theobroma cacao
TCM_042240
I
0.812
Pavir.Ca01475
Panicum virgatum
Pavir.Ca01475
I
0.811
BRADI4G01950
Brachypodium distachyon
BRADI4G01950
I
0.811
GSMUA_Achr5G23900_001
Musa acuminata
GSMUA_Achr5G23900_001
I
0.811
Ciclev10013781m.g
Citrus clementina
Ciclev10013781m.g
I
0.811
Lus10032887.g
Linum usitatissimum
Lus10032887.g
I
0.811
Solyc04g056360.2
Solanum lycopersicum
Solyc04g056360.2
I
0.811
Ca_20508
Cicer arietinum
Ca_20508
I
0.811
Lus10027139.g
Linum usitatissimum
Lus10027139.g
I
0.811
mgf003063m
Mimulus guttatus
mgf003063m
I
0.811
orange1.1g010802m.g
Citrus sinensis
orange1.1g010802m.g
I
0.811
MTR_3g009470
Medicago truncatula
MTR_3g009470
I
0.811
Lus10020215.g
Linum usitatissimum
Lus10020215.g
I
0.810
Cagra.3745s0024
Capsella grandiflora
Cagra.3745s0024
I
0.810
Bostr.26833s0636
Boechera stricta
Bostr.26833s0636
I
0.810
Bra002828
Brassica rapa
Bra002828
I
0.810
LjSGA_020468.1
Lotus japonicus
LjSGA_020468.1
I
0.810
PDK_20s1588191g001
Phoenix dactylifera
PDK_20s1588191g001
I
0.810
chr2.CM0058.50.nc
Lotus japonicus
chr2.CM0058.50.nc
I
0.810
Bo9g123740
Brassica oleracea
Bo9g123740
I
0.810
Carubv10026001m.g
Capsella rubella
Carubv10026001m.g
I
0.810
Aquca_058_00185
Aquilegia coerulea
Aquca_058_00185
I
0.810
GLYMA02G39870
Glycine max
GLYMA02G39870
I
0.810
GLYMA14G38010
Glycine max
GLYMA14G38010
I
0.810
29717.m000222
Ricinus communis
29717.m000222
I
0.810
GSMUA_AchrUn_randomG13180_001
Musa acuminata
GSMUA_AchrUn_randomG13180_001
I
0.810
Ca_17273
Cicer arietinum
Ca_17273
I
0.810
VIT_19s0015g01870
Vitis vinifera
VIT_19s0015g01870
I
0.810
mgf026198m
Mimulus guttatus
mgf026198m
I
0.810
cassava22187.valid.m1
Manihot esculenta
cassava22187.valid.m1
I
0.810
Thhalv10012829m.g
Eutrema salsugineum
Thhalv10012829m.g
I
0.810
VIT_01s0011g00220
Vitis vinifera
VIT_01s0011g00220
I
0.810
cassava24475.valid.m1
Manihot esculenta
cassava24475.valid.m1
I
0.810
cassava22188.valid.m1
Manihot esculenta
cassava22188.valid.m1
I
0.810
MDP0000648338
Malus domestica
MDP0000648338
I
0.809
MDP0000431358
Malus domestica
MDP0000431358
I
0.809
PK00408.1
Cannabis sativa
PK00408.1
I
0.809
28966.m000524
Ricinus communis
28966.m000524
I
0.809
WRKY2
Arabidopsis lyrata
scaffold_802171.1
I
0.809
AMTR_s00023p00102530
Amborella trichopoda
AMTR_s00023p00102530
I
0.809
PRUPE_ppa001924mg
Prunus persica
PRUPE_ppa001924mg
I
0.809
OLONG_005713
Oryza longistaminata
OLONG_005713
I
0.809
gene01197-v1.0-hybrid
Fragaria vesca
gene01197-v1.0-hybrid
I
0.809
MTR_5g074400
Medicago truncatula
MTR_5g074400
I
0.809
cassava30577.valid.m1
Manihot esculenta
cassava30577.valid.m1
I
0.809
Pm000304
Prunus mume
Pm000304
I
0.809
cassava400.valid.m1
Manihot esculenta
cassava400.valid.m1
I
0.809
AMTR_s00089p00116340
Amborella trichopoda
AMTR_s00089p00116340
I
0.809
Bo2g136900
Brassica oleracea
Bo2g136900
I
0.809
WRKY2
Arabidopsis thaliana
AT5G56270
D
0.809
GLYMA01G31921
Glycine max
GLYMA01G31921
I
0.808
GLYMA03G05220
Glycine max
GLYMA03G05220
I
0.808
Bra028939
Brassica rapa
Bra028939
I
0.808
Bra026554
Brassica rapa
Bra026554
I
0.808
PK21041.1
Cannabis sativa
PK21041.1
I
0.808
GLYMA04G12830
Glycine max
GLYMA04G12830
I
0.808
Bo3g021100
Brassica oleracea
Bo3g021100
I
0.808
GSMUA_Achr7G00610_001
Musa acuminata
GSMUA_Achr7G00610_001
I
0.808
Cagra.3501s0106
Capsella grandiflora
Cagra.3501s0106
I
0.808
Carubv10008859m.g
Capsella rubella
Carubv10008859m.g
I
0.808
evm.TU.supercontig_2.345
Carica papaya
evm.TU.supercontig_2.345
I
0.808
Lus10026838.g
Linum usitatissimum
Lus10026838.g
I
0.808
Aquca_005_00209
Aquilegia coerulea
Aquca_005_00209
I
0.808
GLYMA06G47880
Glycine max
GLYMA06G47880
I
0.808
GLYMA11G29720
Glycine max
GLYMA11G29720
I
0.808
GLYMA18G06360
Glycine max
GLYMA18G06360
I
0.808
SapurV1A.0014s0680
Salix purpurea
SapurV1A.0014s0680
I
0.808