CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000260803
(
Malus domestica
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
MDP0000260803
T356544_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY2
M02567_2.00
Arabidopsis thaliana
BRGTCAAM
KTTGACYV
PBM
Weirauch et al.(2014)
pTH8832
0.809
0.544
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000260803
WRKY
113
169
DDGYHWRKYGQKSVKGNXYVRSYYRCTHPKCEVKRQVERKHSGQITDTIYFGEHEHS
MDP0000260803
WRKY
288
345
SDGYRWRKYGQKLVKGNPNPRSYYRCSNPGCPVRKHVERASHDSKVVIATYEGQHDHD
Links
Other
WRKY
family TFs
Other
Malus domestica
TFs
116 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy