Pavir.Ca00085 (Panicum virgatum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Pavir.Ca00085 T356697_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca00085.1.p WRKY 108 172
Pavir.Ca00085.2.p WRKY 106 170
Pavir.Ca00085.3.p WRKY 108 171

Links

Other WRKY family TFs
Other Panicum virgatum TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Si010813m.g Setaria italica Si010813m.g N 0.886
Sb08g002520 Sorghum bicolor Sb08g002520 I 0.880
Pavir.J20374 Panicum virgatum Pavir.J20374 N 0.879
GRMZM2G005207 Zea mays GRMZM2G005207 I 0.874
Pavir.J12092 Panicum virgatum Pavir.J12092 I 0.871
LPERR12G01100 Leersia perrieri LPERR12G01100 I 0.855
OBART11G01120 Oryza barthii OBART11G01120 I 0.854
OBART12G00860 Oryza barthii OBART12G00860 I 0.854
OGLUM11G00880 Oryza glumaepatula OGLUM11G00880 I 0.854
BGIOSGA036755 Oryza indica BGIOSGA036755 I 0.854
ORGLA11G0202100 Oryza glaberrima ORGLA11G0202100 I 0.854
ONIVA11G01190 Oryza nivara ONIVA11G01190 I 0.854
BGIOSGA034611 Oryza indica BGIOSGA034611 I 0.854
ORGLA12G0007700 Oryza glaberrima ORGLA12G0007700 I 0.854
OB12G11040 Oryza brachyantha OB12G11040 I 0.852
OMERI11G01580 Oryza meridionalis OMERI11G01580 I 0.850
OMERI11G01540 Oryza meridionalis OMERI11G01540 I 0.850
MLOC_68369 Hordeum vulgare MLOC_68369 N 0.846
OPUNC12G01000 Oryza punctata OPUNC12G01000 N 0.844
OPUNC11G00990 Oryza punctata OPUNC11G00990 N 0.844
TRIUR3_24639 Triticum urartu TRIUR3_24639 N 0.842
F775_23346 Aegilops tauschii F775_23346 N 0.842
Traes_5BL_175E7FC38 Triticum aestivum Traes_5BL_175E7FC38 N 0.842
Traes_5DL_09F1F8F79 Triticum aestivum Traes_5DL_09F1F8F79 N 0.842
BRADI4G44342 Brachypodium distachyon BRADI4G44342 N 0.838
LPERR07G11260 Leersia perrieri LPERR07G11260 I 0.820
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I 0.819
PDK_20s1519811g001 Phoenix dactylifera PDK_20s1519811g001 I 0.815
Pavir.J05812 Panicum virgatum Pavir.J05812 I 0.814
GRMZM2G029292 Zea mays GRMZM2G029292 I 0.814
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I 0.814
OB11G27340 Oryza brachyantha OB11G27340 I 0.811
Si003782m.g Setaria italica Si003782m.g N 0.811
OBART05G20330 Oryza barthii OBART05G20330 I 0.810
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.810
ORGLA05G0177400 Oryza glaberrima ORGLA05G0177400 I 0.810
TRIUR3_31234 Triticum urartu TRIUR3_31234 N 0.809
Sb03g038190 Sorghum bicolor Sb03g038190 N 0.809