Pavir.Ea03257 (Panicum virgatum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Pavir.Ea03257 T356737_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY21
M02553_2.00
Arabidopsis thaliana
NNRGTCAAMN

NKTTGACYNN
PBM
Weirauch et al.(2014)
pTH7422
0.810 0.467
WRKY21
M07389_2.00
Arabidopsis thaliana
HAAAGTCAACNNH

DNNGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a
0.810 0.467
WRKY21
M07390_2.00
Arabidopsis thaliana
HAAAGTCAACK

MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_col
0.810 0.467
WRKY63
M02546_2.00
Arabidopsis thaliana
NGGTCAAN

NTTGACCN
PBM
Weirauch et al.(2014)
pTH8182
0.809 0.483
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea03257.1.p WRKY 131 192

Links

Other WRKY family TFs
Other Panicum virgatum TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pavir.Eb03562 Panicum virgatum Pavir.Eb03562 I 0.902
Si002121m.g Setaria italica Si002121m.g I 0.893
Sb03g038200 Sorghum bicolor Sb03g038200 N 0.882
GRMZM2G158328 Zea mays GRMZM2G158328 I 0.875
MLOC_3853 Hordeum vulgare MLOC_3853 N 0.846
Pavir.J33941 Panicum virgatum Pavir.J33941 N 0.840
F775_23296 Aegilops tauschii F775_23296 N 0.839
BRADI2G53510 Brachypodium distachyon BRADI2G53510 I 0.832
Si036565m.g Setaria italica Si036565m.g I 0.829
LPERR01G30490 Leersia perrieri LPERR01G30490 I 0.827
Pavir.Eb03559 Panicum virgatum Pavir.Eb03559 I 0.826
Si004791m.g Setaria italica Si004791m.g I 0.826
Pavir.J31756 Panicum virgatum Pavir.J31756 I 0.826
SELMODRAFT_113487 Selaginella moellendorffii SELMODRAFT_113487 I 0.821
GRMZM2G030272 Zea mays GRMZM2G030272 N 0.821
SELMODRAFT_29692 Selaginella moellendorffii SELMODRAFT_29692 I 0.821
OPUNC05G17980 Oryza punctata OPUNC05G17980 I 0.821
Sb01g036180 Sorghum bicolor Sb01g036180 I 0.820
Sb03g038170 Sorghum bicolor Sb03g038170 I 0.820
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.819
GRMZM2G382350 Zea mays GRMZM2G382350 I 0.819
BRADI1G63220 Brachypodium distachyon BRADI1G63220 I 0.819
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.819
GRMZM2G029292 Zea mays GRMZM2G029292 I 0.818
ONIVA05G21440 Oryza nivara ONIVA05G21440 I 0.818
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I 0.818
GSMUA_Achr7G22020_001 Musa acuminata GSMUA_Achr7G22020_001 I 0.818
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I 0.818
BGIOSGA030346 Oryza indica BGIOSGA030346 I 0.818
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I 0.818
OS05G0478400 Oryza sativa OS05G0478400 I 0.818
OMERI05G18170 Oryza meridionalis OMERI05G18170 I 0.818
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I 0.818
OPUNC05G18030 Oryza punctata OPUNC05G18030 I 0.817
F775_22808 Aegilops tauschii F775_22808 I 0.817
28455.m000362 Ricinus communis 28455.m000362 I 0.817
cassava33373.m1 Manihot esculenta cassava33373.m1 I 0.817
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.817
TCM_016012 Theobroma cacao TCM_016012 I 0.817
Pm023533 Prunus mume Pm023533 I 0.816
Pavir.Ib01500 Panicum virgatum Pavir.Ib01500 N 0.816
Si039519m.g Setaria italica Si039519m.g N 0.816
Sb01g036870 Sorghum bicolor Sb01g036870 N 0.816
PRUPE_ppa023256mg Prunus persica PRUPE_ppa023256mg I 0.816
ORGLA05G0177400 Oryza glaberrima ORGLA05G0177400 I 0.816
OBART05G20330 Oryza barthii OBART05G20330 I 0.816
OMERI05G18260 Oryza meridionalis OMERI05G18260 I 0.815
OGLUM01G39380 Oryza glumaepatula OGLUM01G39380 N 0.815
OBART05G20340 Oryza barthii OBART05G20340 I 0.815
Sb02g011050 Sorghum bicolor Sb02g011050 I 0.815
cassava43475.valid.m1 Manihot esculenta cassava43475.valid.m1 I 0.815
ORUFI01G38680 Oryza rufipogon ORUFI01G38680 N 0.815
ORGLA01G0292000 Oryza glaberrima ORGLA01G0292000 N 0.815
OPUNC05G18000 Oryza punctata OPUNC05G18000 I 0.815
ONIVA01G40380 Oryza nivara ONIVA01G40380 N 0.815
OPUNC01G34290 Oryza punctata OPUNC01G34290 N 0.815
OB05G27850 Oryza brachyantha OB05G27850 I 0.815
BGIOSGA000583 Oryza indica BGIOSGA000583 N 0.815
BRADI2G22230 Brachypodium distachyon BRADI2G22230 I 0.814
MLOC_11088 Hordeum vulgare MLOC_11088 N 0.814
OGLUM05G21510 Oryza glumaepatula OGLUM05G21510 I 0.814
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.814
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I 0.814
MLOC_15430 Hordeum vulgare MLOC_15430 I 0.814
OMERI01G32500 Oryza meridionalis OMERI01G32500 N 0.813
BGIOSGA012571 Oryza indica BGIOSGA012571 I 0.813
OMERI03G14670 Oryza meridionalis OMERI03G14670 I 0.813
OLONG_027124 Oryza longistaminata OLONG_027124 I 0.813
ONIVA03G17390 Oryza nivara ONIVA03G17390 I 0.813
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I 0.813
F775_43334 Aegilops tauschii F775_43334 I 0.813
OS03G0335200 Oryza sativa OS03G0335200 I 0.813
Lus10042538.g Linum usitatissimum Lus10042538.g I 0.813
ORUFI03G16960 Oryza rufipogon ORUFI03G16960 I 0.813
OLONG_024544 Oryza longistaminata OLONG_024544 I 0.813
OBART03G16400 Oryza barthii OBART03G16400 I 0.813
TRIUR3_22128 Triticum urartu TRIUR3_22128 I 0.813
OB03G26140 Oryza brachyantha OB03G26140 I 0.813
TRIUR3_20905 Triticum urartu TRIUR3_20905 N 0.813
OGLUM03G16780 Oryza glumaepatula OGLUM03G16780 I 0.813
Lus10021999.g Linum usitatissimum Lus10021999.g I 0.813
Traes_5BL_8688F70C9 Triticum aestivum Traes_5BL_8688F70C9 I 0.813
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.812
LPERR05G16150 Leersia perrieri LPERR05G16150 I 0.812
OPUNC01G34280 Oryza punctata OPUNC01G34280 I 0.812
F775_07845 Aegilops tauschii F775_07845 I 0.812
F775_04954 Aegilops tauschii F775_04954 N 0.812
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.812
TRIUR3_16097 Triticum urartu TRIUR3_16097 N 0.812
OGLUM05G21440 Oryza glumaepatula OGLUM05G21440 I 0.812
BGIOSGA004704 Oryza indica BGIOSGA004704 I 0.811
LPERR03G14340 Leersia perrieri LPERR03G14340 I 0.811
LPERR01G30500 Leersia perrieri LPERR01G30500 I 0.811
OS05G0478800 Oryza sativa OS05G0478800 I 0.811
OS01G0820400 Oryza sativa OS01G0820400 N 0.811
Traes_1AL_309623B48 Triticum aestivum Traes_1AL_309623B48 N 0.811
Traes_1DL_DFE1721E0 Triticum aestivum Traes_1DL_DFE1721E0 N 0.811
TRIUR3_22129 Triticum urartu TRIUR3_22129 N 0.811
gene16584-v1.0-hybrid Fragaria vesca gene16584-v1.0-hybrid I 0.811
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.811
Traes_1BL_46340D685 Triticum aestivum Traes_1BL_46340D685 N 0.811
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I 0.811
GLYMA01G43420 Glycine max GLYMA01G43420 I 0.811
Sb08g002590 Sorghum bicolor Sb08g002590 N 0.811
F775_02926 Aegilops tauschii F775_02926 N 0.811
OB11G10740 Oryza brachyantha OB11G10740 N 0.811
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.811
ONIVA01G40370 Oryza nivara ONIVA01G40370 I 0.811
OPUNC01G34260 Oryza punctata OPUNC01G34260 N 0.811
MLOC_57051 Hordeum vulgare MLOC_57051 I 0.811
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.811
OGLUM01G39350 Oryza glumaepatula OGLUM01G39350 N 0.811
OLONG_000628 Oryza longistaminata OLONG_000628 N 0.811
OMERI01G32440 Oryza meridionalis OMERI01G32440 N 0.811
OB01G44150 Oryza brachyantha OB01G44150 I 0.811
ORGLA01G0291600 Oryza glaberrima ORGLA01G0291600 N 0.811
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.811
ORUFI01G38670 Oryza rufipogon ORUFI01G38670 I 0.811
OBART01G35350 Oryza barthii OBART01G35350 I 0.811
ORUFI01G38630 Oryza rufipogon ORUFI01G38630 N 0.811
BGIOSGA004701 Oryza indica BGIOSGA004701 N 0.811
OBART01G35280 Oryza barthii OBART01G35280 N 0.811
ORGLA01G0291900 Oryza glaberrima ORGLA01G0291900 I 0.811
TRIUR3_27575 Triticum urartu TRIUR3_27575 I 0.810
Thhalv10016853m.g Eutrema salsugineum Thhalv10016853m.g I 0.810
OGLUM05G02170 Oryza glumaepatula OGLUM05G02170 I 0.810
Carubv10023424m.g Capsella rubella Carubv10023424m.g I 0.810
Gorai.004G247000 Gossypium raimondii Gorai.004G247000 I 0.810
Gorai.007G122300 Gossypium raimondii Gorai.007G122300 I 0.810
Cagra.0567s0023 Capsella grandiflora Cagra.0567s0023 I 0.810
Traes_3B_8B0D448D8 Triticum aestivum Traes_3B_8B0D448D8 I 0.810
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.810
Bostr.24513s0175 Boechera stricta Bostr.24513s0175 I 0.810
BGIOSGA019117 Oryza indica BGIOSGA019117 I 0.810
OBART05G02110 Oryza barthii OBART05G02110 I 0.810
Bo3g024750 Brassica oleracea Bo3g024750 I 0.810
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.810
Bo4g173290 Brassica oleracea Bo4g173290 I 0.810
Bo4g056260 Brassica oleracea Bo4g056260 I 0.810
Bra018303 Brassica rapa Bra018303 I 0.810
Bra021652 Brassica rapa Bra021652 I 0.810
MLOC_6114 Hordeum vulgare MLOC_6114 I 0.810
SapurV1A.1571s0090 Salix purpurea SapurV1A.1571s0090 I 0.810
WRKY21 Arabidopsis thaliana AT2G30590 D 0.810
F775_22564 Aegilops tauschii F775_22564 I 0.810
MLOC_22356 Hordeum vulgare MLOC_22356 I 0.810
ORUFI05G02200 Oryza rufipogon ORUFI05G02200 I 0.810
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.810
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.810
WRKY21 Arabidopsis lyrata scaffold_401549.1 I 0.810
Bra022808 Brassica rapa Bra022808 I 0.810
LPERR05G01920 Leersia perrieri LPERR05G01920 I 0.810
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.810
OMERI05G02210 Oryza meridionalis OMERI05G02210 I 0.810
MDP0000234335 Malus domestica MDP0000234335 I 0.810
Si024816m.g Setaria italica Si024816m.g I 0.809
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.809
Eucgr.G03145 Eucalyptus grandis Eucgr.G03145 I 0.809
Eucgr.B01503 Eucalyptus grandis Eucgr.B01503 I 0.809
TRIUR3_33054 Triticum urartu TRIUR3_33054 I 0.809
OB01G44130 Oryza brachyantha OB01G44130 I 0.809
WRKY63 Arabidopsis thaliana AT1G66600 D 0.809
Gorai.004G199500 Gossypium raimondii Gorai.004G199500 I 0.809
Pavir.Ia00625 Panicum virgatum Pavir.Ia00625 I 0.808
Pavir.J08083 Panicum virgatum Pavir.J08083 I 0.808
BGIOSGA013535 Oryza indica BGIOSGA013535 I 0.808
Pavir.J41073 Panicum virgatum Pavir.J41073 I 0.808
GRMZM2G018487 Zea mays GRMZM2G018487 I 0.808
ONIVA10G03010 Oryza nivara ONIVA10G03010 I 0.808
OPUNC03G30830 Oryza punctata OPUNC03G30830 I 0.808
ORGLA03G0303900 Oryza glaberrima ORGLA03G0303900 I 0.808
MLOC_76441 Hordeum vulgare MLOC_76441 I 0.808
OMERI03G31020 Oryza meridionalis OMERI03G31020 I 0.808
OBART03G33630 Oryza barthii OBART03G33630 I 0.808
OGLUM03G33290 Oryza glumaepatula OGLUM03G33290 I 0.808
OLONG_003947 Oryza longistaminata OLONG_003947 I 0.808
ORUFI03G35010 Oryza rufipogon ORUFI03G35010 I 0.808
LPERR03G28150 Leersia perrieri LPERR03G28150 I 0.808
Traes_5BL_AEF9FE805 Triticum aestivum Traes_5BL_AEF9FE805 I 0.808
Traes_5DL_A54ED44C9 Triticum aestivum Traes_5DL_A54ED44C9 I 0.808
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.808
Traes_5AL_A3653B781 Triticum aestivum Traes_5AL_A3653B781 I 0.808
BRADI1G09170 Brachypodium distachyon BRADI1G09170 I 0.808
OS03G0741400 Oryza sativa OS03G0741400 I 0.808
Sb01g008550 Sorghum bicolor Sb01g008550 I 0.808
Si036039m.g Setaria italica Si036039m.g I 0.808
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.808