CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Gb02382
(
Panicum virgatum
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
Pavir.Gb02382
T356782_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Gb02382.1.p
WRKY
2
49
SFNSIFRFYYRCTYKNDMKCPATKQVQQKDTSDPPLFSVTYFNHHTCS
Pavir.Gb02382.2.p
WRKY
1
31
MKCPATKQVQQKDTSDPPLFSVTYFNHHTCS
Links
Other
WRKY
family TFs
Other
Panicum virgatum
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si011007m.g
Setaria italica
Si011007m.g
N
0.830
Si026831m.g
Setaria italica
Si026831m.g
N
0.830
ORGLA11G0201700
Oryza glaberrima
ORGLA11G0201700
N
0.827
OPUNC12G00960
Oryza punctata
OPUNC12G00960
N
0.827
BGIOSGA034615
Oryza indica
BGIOSGA034615
N
0.827
ORGLA12G0007300
Oryza glaberrima
ORGLA12G0007300
N
0.827
OPUNC11G00940
Oryza punctata
OPUNC11G00940
N
0.827
ORUFI12G01160
Oryza rufipogon
ORUFI12G01160
N
0.827
OS12G0116400
Oryza sativa
OS12G0116400
N
0.827
OS11G0116900
Oryza sativa
OS11G0116900
N
0.827
OGLUM12G01270
Oryza glumaepatula
OGLUM12G01270
N
0.827
ORUFI11G01040
Oryza rufipogon
ORUFI11G01040
N
0.827
ONIVA11G01030
Oryza nivara
ONIVA11G01030
N
0.827
LPERR12G01060
Leersia perrieri
LPERR12G01060
N
0.827
LPERR11G00950
Leersia perrieri
LPERR11G00950
N
0.827
BRADI4G25717
Brachypodium distachyon
BRADI4G25717
N
0.827
OB12G11010
Oryza brachyantha
OB12G11010
N
0.827
OBART12G00820
Oryza barthii
OBART12G00820
N
0.827
OBART11G01090
Oryza barthii
OBART11G01090
N
0.827
BGIOSGA036759
Oryza indica
BGIOSGA036759
N
0.827
OB11G10740
Oryza brachyantha
OB11G10740
N
0.826
Pavir.J31578
Panicum virgatum
Pavir.J31578
N
0.824
Sb05g001175
Sorghum bicolor
Sb05g001175
N
0.822
OGLUM12G01380
Oryza glumaepatula
OGLUM12G01380
N
0.822
GRMZM2G063216
Zea mays
GRMZM2G063216
N
0.819
MLOC_34522
Hordeum vulgare
MLOC_34522
N
0.816
Traes_4DS_FE38A59D0
Triticum aestivum
Traes_4DS_FE38A59D0
N
0.816
Traes_4BS_A6D9EB0E5
Triticum aestivum
Traes_4BS_A6D9EB0E5
N
0.816
Traes_4AL_9E0D1CFA6
Triticum aestivum
Traes_4AL_9E0D1CFA6
N
0.816
F775_28648
Aegilops tauschii
F775_28648
N
0.816