CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J33941
(
Panicum virgatum
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
Pavir.J33941
T356857_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J33941.1.p
WRKY
675
739
SDGYQWRKYGVKKIADTQFQRFYYRCKFRRERNCRATKQVQQCSNGDPCNPPQFVVTYFNEHTCD
Links
Other
WRKY
family TFs
Other
Panicum virgatum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si002121m.g
Setaria italica
Si002121m.g
I
0.849
Sb03g038200
Sorghum bicolor
Sb03g038200
N
0.849
GRMZM2G158328
Zea mays
GRMZM2G158328
I
0.845
Pavir.Ea03257
Panicum virgatum
Pavir.Ea03257
I
0.840
Pavir.Eb03562
Panicum virgatum
Pavir.Eb03562
I
0.838
Pavir.Ib01500
Panicum virgatum
Pavir.Ib01500
N
0.815
Si039519m.g
Setaria italica
Si039519m.g
N
0.815
Sb01g036870
Sorghum bicolor
Sb01g036870
N
0.815
GRMZM2G030272
Zea mays
GRMZM2G030272
N
0.811
MLOC_3853
Hordeum vulgare
MLOC_3853
N
0.808