Pavir.J39511 (Panicum virgatum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Pavir.J39511 T356870_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN

NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.815 0.567
WRKY62
M02561_2.00
Arabidopsis thaliana
TRGTCAAM

KTTGACYA
PBM
Weirauch et al.(2014)
pTH8246
0.813 0.500
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J39511.1.p WRKY 137 202

Links

Other WRKY family TFs
Other Panicum virgatum TFs

Invalid Input OrderBy

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action