Pavir.J39511 (Panicum virgatum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Pavir.J39511 T356870_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN

NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.815 0.567
WRKY62
M02561_2.00
Arabidopsis thaliana
TRGTCAAM

KTTGACYA
PBM
Weirauch et al.(2014)
pTH8246
0.813 0.500
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J39511.1.p WRKY 137 202

Links

Other WRKY family TFs
Other Panicum virgatum TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
WRKY62 Arabidopsis thaliana AT5G01900 D 0.813
WRKY38 Arabidopsis thaliana AT5G22570 D 0.815
Traes_2AS_6269D889E Triticum aestivum Traes_2AS_6269D889E I 0.819
Sb03g038210 Sorghum bicolor Sb03g038210 I 0.810
Sb02g043030 Sorghum bicolor Sb02g043030 I 0.817
Sb02g022290 Sorghum bicolor Sb02g022290 I 0.809
PRUPE_ppa008573mg Prunus persica PRUPE_ppa008573mg I 0.817
PGSC0003DMG400019884 Solanum tuberosum PGSC0003DMG400019884 I 0.814
PGSC0003DMG400005835 Solanum tuberosum PGSC0003DMG400005835 I 0.809
PGSC0003DMG400000211 Solanum tuberosum PGSC0003DMG400000211 I 0.810
OS09G0334500 Oryza sativa OS09G0334500 I 0.809
OS08G0386200 Oryza sativa OS08G0386200 I 0.811
OS07G0680400 Oryza sativa OS07G0680400 I 0.827
Sb07g019400 Sorghum bicolor Sb07g019400 I 0.817
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.815
Solyc10g009550.2 Solanum lycopersicum Solyc10g009550.2 I 0.813
Solyc08g008280.2 Solanum lycopersicum Solyc08g008280.2 I 0.809
Solyc01g095630.2 Solanum lycopersicum Solyc01g095630.2 I 0.810
Si030395m.g Setaria italica Si030395m.g I 0.816
Si028202m.g Setaria italica Si028202m.g I 0.832
Si025181m.g Setaria italica Si025181m.g I 0.831
Si015433m.g Setaria italica Si015433m.g I 0.812
Si002401m.g Setaria italica Si002401m.g I 0.815
SELMODRAFT_29703 Selaginella moellendorffii SELMODRAFT_29703 I 0.809
SELMODRAFT_29702 Selaginella moellendorffii SELMODRAFT_29702 I 0.809
OS05G0478400 Oryza sativa OS05G0478400 I 0.809
OS01G0821600 Oryza sativa OS01G0821600 I 0.820
ORUFI09G06720 Oryza rufipogon ORUFI09G06720 I 0.809
OPUNC05G17980 Oryza punctata OPUNC05G17980 I 0.812
OPUNC05G07410 Oryza punctata OPUNC05G07410 I 0.835
OPUNC01G34300 Oryza punctata OPUNC01G34300 I 0.810
ONIVA11G01240 Oryza nivara ONIVA11G01240 I 0.851
ONIVA09G05410 Oryza nivara ONIVA09G05410 I 0.809
ONIVA08G13920 Oryza nivara ONIVA08G13920 I 0.811
ONIVA07G26140 Oryza nivara ONIVA07G26140 I 0.829
ONIVA05G21440 Oryza nivara ONIVA05G21440 I 0.809
ONIVA05G08650 Oryza nivara ONIVA05G08650 I 0.835
ONIVA01G40390 Oryza nivara ONIVA01G40390 I 0.820
OPUNC07G24890 Oryza punctata OPUNC07G24890 I 0.830
ORGLA01G0292200 Oryza glaberrima ORGLA01G0292200 I 0.820
ORUFI08G15010 Oryza rufipogon ORUFI08G15010 I 0.811
ORUFI07G27440 Oryza rufipogon ORUFI07G27440 I 0.829
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I 0.809
ORUFI05G08750 Oryza rufipogon ORUFI05G08750 I 0.835
ORUFI01G38690 Oryza rufipogon ORUFI01G38690 I 0.820
ORGLA11G0202000 Oryza glaberrima ORGLA11G0202000 I 0.851
ORGLA08G0116200 Oryza glaberrima ORGLA08G0116200 I 0.811
ORGLA07G0207800 Oryza glaberrima ORGLA07G0207800 I 0.829
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I 0.809
ORGLA05G0070000 Oryza glaberrima ORGLA05G0070000 I 0.835
OMERI09G04750 Oryza meridionalis OMERI09G04750 I 0.810
Traes_2BS_B65714572 Triticum aestivum Traes_2BS_B65714572 I 0.821
PDK_20s1535141g002 Phoenix dactylifera PDK_20s1535141g002 I 0.813
Pavir.Bb02088 Panicum virgatum Pavir.Bb02088 I 0.810
Pavir.Ba02545 Panicum virgatum Pavir.Ba02545 I 0.810
Pavir.Ba00227 Panicum virgatum Pavir.Ba00227 I 0.831
MDP0000754989 Malus domestica MDP0000754989 I 0.808
MDP0000315045 Malus domestica MDP0000315045 I 0.812
MDP0000299114 Malus domestica MDP0000299114 I 0.817
MDP0000146360 Malus domestica MDP0000146360 I 0.817
Gorai.004G134600 Gossypium raimondii Gorai.004G134600 I 0.808
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.820
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.809
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.821
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I 0.900
PDK_20s1519811g001 Phoenix dactylifera PDK_20s1519811g001 I 0.808
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I 0.835
PK10616.1 Cannabis sativa PK10616.1 I 0.812
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.812
Thhalv10004616m.g Eutrema salsugineum Thhalv10004616m.g I 0.808
Pavir.J37854 Panicum virgatum Pavir.J37854 I 0.813
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I 0.903
Pavir.Fa01520 Panicum virgatum Pavir.Fa01520 I 0.813
Pavir.Eb03563 Panicum virgatum Pavir.Eb03563 I 0.812
Pavir.Ea03258 Panicum virgatum Pavir.Ea03258 I 0.814
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.815
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.816
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.815
TRIUR3_14306 Triticum urartu TRIUR3_14306 I 0.820
TRIUR3_06813 Triticum urartu TRIUR3_06813 I 0.816
TRIUR3_05298 Triticum urartu TRIUR3_05298 I 0.830
Traes_5DL_C93641E43 Triticum aestivum Traes_5DL_C93641E43 I 0.820
Traes_5DL_5C93510D5 Triticum aestivum Traes_5DL_5C93510D5 I 0.828
Traes_5BL_F853EA802 Triticum aestivum Traes_5BL_F853EA802 I 0.824
Traes_5BL_0A3D332A8 Triticum aestivum Traes_5BL_0A3D332A8 I 0.820
Traes_4AS_0DA136E0E Triticum aestivum Traes_4AS_0DA136E0E I 0.813
Traes_3DS_9A02CF31D Triticum aestivum Traes_3DS_9A02CF31D I 0.810
TRAES3BF005100010CFD_g Triticum aestivum TRAES3BF005100010CFD_g I 0.809
TRIUR3_17401 Triticum urartu TRIUR3_17401 I 0.809
TRIUR3_30416 Triticum urartu TRIUR3_30416 I 0.820
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.816
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.812
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.811
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.808
mgf015087m Mimulus guttatus mgf015087m I 0.810
mgf006355m Mimulus guttatus mgf006355m I 0.810
Pm024064 Prunus mume Pm024064 I 0.812
Cla004301 Citrullus lanatus Cla004301 I 0.809
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I 0.811
VIT_02s0025g01280 Vitis vinifera VIT_02s0025g01280 I 0.809
TRAES3BF001300030CFD_g Triticum aestivum TRAES3BF001300030CFD_g I 0.809
OMERI08G11390 Oryza meridionalis OMERI08G11390 I 0.811
MTR_5g067680 Medicago truncatula MTR_5g067680 I 0.808
LPERR01G30490 Leersia perrieri LPERR01G30490 I 0.813
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.828
GSMUA_Achr7G22020_001 Musa acuminata GSMUA_Achr7G22020_001 I 0.816
GSMUA_Achr5G08580_001 Musa acuminata GSMUA_Achr5G08580_001 I 0.830
GSMUA_Achr5G07490_001 Musa acuminata GSMUA_Achr5G07490_001 I 0.808
GRMZM2G441031 Zea mays GRMZM2G441031 I 0.817
GRMZM2G324999 Zea mays GRMZM2G324999 I 0.816
GRMZM2G061408 Zea mays GRMZM2G061408 I 0.816
GRMZM2G059562 Zea mays GRMZM2G059562 I 0.809
GRMZM2G025895 Zea mays GRMZM2G025895 I 0.816
LPERR01G30500 Leersia perrieri LPERR01G30500 I 0.814
LPERR05G06630 Leersia perrieri LPERR05G06630 I 0.833
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.814
MLOC_78461 Hordeum vulgare MLOC_78461 I 0.817
MLOC_74606 Hordeum vulgare MLOC_74606 I 0.812
MLOC_71897 Hordeum vulgare MLOC_71897 I 0.823
MLOC_52504 Hordeum vulgare MLOC_52504 I 0.824
MLOC_45055 Hordeum vulgare MLOC_45055 I 0.819
LPERR12G01070 Leersia perrieri LPERR12G01070 I 0.809
Bra028918 Brassica rapa Bra028918 I 0.813
LPERR11G00960 Leersia perrieri LPERR11G00960 I 0.817
LPERR09G04330 Leersia perrieri LPERR09G04330 I 0.810
LPERR07G23280 Leersia perrieri LPERR07G23280 I 0.830
GLYMA01G43420 Glycine max GLYMA01G43420 I 0.814
F775_30853 Aegilops tauschii F775_30853 I 0.820
BRADI1G17660 Brachypodium distachyon BRADI1G17660 I 0.817
BGIOSGA040489 Oryza indica BGIOSGA040489 I 0.811
BGIOSGA034612 Oryza indica BGIOSGA034612 I 0.851
BGIOSGA030535 Oryza indica BGIOSGA030535 I 0.809
BGIOSGA030346 Oryza indica BGIOSGA030346 I 0.809
BGIOSGA023706 Oryza indica BGIOSGA023706 I 0.829
BGIOSGA017556 Oryza indica BGIOSGA017556 I 0.835
BGIOSGA004705 Oryza indica BGIOSGA004705 I 0.820
WRKY67 Arabidopsis thaliana AT1G66550 I 0.809
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.813
BRADI2G53510 Brachypodium distachyon BRADI2G53510 I 0.810
BRADI2G53520 Brachypodium distachyon BRADI2G53520 I 0.813
BRADI3G34850 Brachypodium distachyon BRADI3G34850 I 0.816
F775_27484 Aegilops tauschii F775_27484 I 0.828
F775_25840 Aegilops tauschii F775_25840 I 0.820
F775_21933 Aegilops tauschii F775_21933 I 0.824
F775_15928 Aegilops tauschii F775_15928 I 0.816
F775_07376 Aegilops tauschii F775_07376 I 0.813
F775_03184 Aegilops tauschii F775_03184 I 0.809
F775_00757 Aegilops tauschii F775_00757 I 0.825
BRADI4G44360 Brachypodium distachyon BRADI4G44360 I 0.838
BRADI4G44350 Brachypodium distachyon BRADI4G44350 I 0.832
BRADI4G28280 Brachypodium distachyon BRADI4G28280 I 0.821
AC205562.3_FG002 Zea mays AC205562.3_FG002 I 0.816
MTR_8g099350 Medicago truncatula MTR_8g099350 I 0.809
OMERI05G18260 Oryza meridionalis OMERI05G18260 I 0.810
OLONG_019907 Oryza longistaminata OLONG_019907 I 0.835
OGLUM01G39390 Oryza glumaepatula OGLUM01G39390 I 0.820
OGLUM05G08540 Oryza glumaepatula OGLUM05G08540 I 0.835
OBART11G01110 Oryza barthii OBART11G01110 I 0.851
OBART09G06020 Oryza barthii OBART09G06020 I 0.810
OBART07G26430 Oryza barthii OBART07G26430 I 0.829
OBART05G20340 Oryza barthii OBART05G20340 I 0.810
OBART05G08130 Oryza barthii OBART05G08130 I 0.835
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I 0.809
OGLUM07G10380 Oryza glumaepatula OGLUM07G10380 I 0.811
OGLUM07G26470 Oryza glumaepatula OGLUM07G26470 I 0.829
OMERI05G18170 Oryza meridionalis OMERI05G18170 I 0.809
OMERI01G32510 Oryza meridionalis OMERI01G32510 I 0.820
OLONG_008209 Oryza longistaminata OLONG_008209 I 0.828
OLONG_000636 Oryza longistaminata OLONG_000636 I 0.820
OMERI07G23060 Oryza meridionalis OMERI07G23060 I 0.829
OGLUM11G00870 Oryza glumaepatula OGLUM11G00870 I 0.851
OGLUM11G00850 Oryza glumaepatula OGLUM11G00850 I 0.824
OGLUM09G06630 Oryza glumaepatula OGLUM09G06630 I 0.810
OBART01G35380 Oryza barthii OBART01G35380 I 0.820
OB11G27340 Oryza brachyantha OB11G27340 I 0.809
OB07G31890 Oryza brachyantha OB07G31890 I 0.830
OB05G17240 Oryza brachyantha OB05G17240 I 0.834
OB01G44170 Oryza brachyantha OB01G44170 I 0.812
OPUNC01G34290 Oryza punctata OPUNC01G34290 N 0.808
Sb05g001220 Sorghum bicolor Sb05g001220 N 0.842
ONIVA11G01230 Oryza nivara ONIVA11G01230 N 0.820
ONIVA11G01050 Oryza nivara ONIVA11G01050 N 0.820
MLOC_68369 Hordeum vulgare MLOC_68369 N 0.808
BRADI4G44342 Brachypodium distachyon BRADI4G44342 N 0.814
Sb08g002560 Sorghum bicolor Sb08g002560 N 0.884
OGLUM12G01400 Oryza glumaepatula OGLUM12G01400 N 0.820
Sb08g002570 Sorghum bicolor Sb08g002570 N 0.824
BRADI4G44370 Brachypodium distachyon BRADI4G44370 N 0.843
OS11G0117500 Oryza sativa OS11G0117500 N 0.859
F775_02479 Aegilops tauschii F775_02479 N 0.847
F775_02480 Aegilops tauschii F775_02480 N 0.834
LPERR11G00970 Leersia perrieri LPERR11G00970 N 0.863
Sb05g001200 Sorghum bicolor Sb05g001200 N 0.810
OMERI11G01520 Oryza meridionalis OMERI11G01520 N 0.820
OMERI11G01570 Oryza meridionalis OMERI11G01570 N 0.859
BGIOSGA000583 Oryza indica BGIOSGA000583 N 0.808
ONIVA01G40380 Oryza nivara ONIVA01G40380 N 0.808
Pavir.J34713 Panicum virgatum Pavir.J34713 N 0.884
Pavir.J09582 Panicum virgatum Pavir.J09582 N 0.832
OS12G0116700 Oryza sativa OS12G0116700 N 0.860
Traes_5BL_175E7FC38 Triticum aestivum Traes_5BL_175E7FC38 N 0.808
OS12G0116600 Oryza sativa OS12G0116600 N 0.820
BGIOSGA034613 Oryza indica BGIOSGA034613 N 0.820
BGIOSGA036756 Oryza indica BGIOSGA036756 N 0.860
BGIOSGA036757 Oryza indica BGIOSGA036757 N 0.820
Pavir.Ca00084 Panicum virgatum Pavir.Ca00084 N 0.833
OPUNC11G00970 Oryza punctata OPUNC11G00970 N 0.820
F775_04232 Aegilops tauschii F775_04232 N 0.822
OPUNC11G00980 Oryza punctata OPUNC11G00980 N 0.863
Traes_5DL_09F1F8F79 Triticum aestivum Traes_5DL_09F1F8F79 N 0.808
GRMZM2G400559 Zea mays GRMZM2G400559 N 0.831
Si010832m.g Setaria italica Si010832m.g N 0.822
ORGLA12G0007500 Oryza glaberrima ORGLA12G0007500 N 0.823
Traes_5AL_69A969FF4 Triticum aestivum Traes_5AL_69A969FF4 N 0.834
ORGLA12G0007600 Oryza glaberrima ORGLA12G0007600 N 0.860
ORUFI01G38680 Oryza rufipogon ORUFI01G38680 N 0.808
OBART11G01100 Oryza barthii OBART11G01100 N 0.820
Si019098m.g Setaria italica Si019098m.g N 0.883
OB11G10760 Oryza brachyantha OB11G10760 N 0.859
Si027360m.g Setaria italica Si027360m.g N 0.824
Si027876m.g Setaria italica Si027876m.g N 0.834
OS11G0117400 Oryza sativa OS11G0117400 N 0.820
OBART12G00850 Oryza barthii OBART12G00850 N 0.860
GRMZM2G169564 Zea mays GRMZM2G169564 N 0.857
TRIUR3_01445 Triticum urartu TRIUR3_01445 N 0.816
OPUNC12G00970 Oryza punctata OPUNC12G00970 N 0.820
OPUNC12G00990 Oryza punctata OPUNC12G00990 N 0.863
F775_23296 Aegilops tauschii F775_23296 N 0.811
F775_23346 Aegilops tauschii F775_23346 N 0.808
ORGLA01G0292000 Oryza glaberrima ORGLA01G0292000 N 0.808
MLOC_3853 Hordeum vulgare MLOC_3853 N 0.808
TRIUR3_26571 Triticum urartu TRIUR3_26571 N 0.847
TRIUR3_24639 Triticum urartu TRIUR3_24639 N 0.808
LPERR12G01080 Leersia perrieri LPERR12G01080 N 0.863
Si010764m.g Setaria italica Si010764m.g N 0.893
OGLUM01G39380 Oryza glumaepatula OGLUM01G39380 N 0.808
ORGLA11G0201900 Oryza glaberrima ORGLA11G0201900 N 0.820
TRIUR3_01447 Triticum urartu TRIUR3_01447 N 0.817
OB12G11030 Oryza brachyantha OB12G11030 N 0.859