Pavir.J39511 (Panicum virgatum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Pavir.J39511 T356870_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN

NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.815 0.567
WRKY62
M02561_2.00
Arabidopsis thaliana
TRGTCAAM

KTTGACYA
PBM
Weirauch et al.(2014)
pTH8246
0.813 0.500
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J39511.1.p WRKY 137 202

Links

Other WRKY family TFs
Other Panicum virgatum TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29609.m000587 Ricinus communis 29609.m000587 N 0.000
Aquca_100_00036 Aquilegia coerulea Aquca_100_00036 N 0.000
ARF1 Arabidopsis lyrata fgenesh2_kg.2__468__AT1G59750.1 N 0.000
ARF24 Oryza sativa OS12G0479400 N 0.000
BGIOSGA036199 Oryza indica BGIOSGA036199 N 0.000
Bo1g090350 Brassica oleracea Bo1g090350 N 0.000
Bo4g083590 Brassica oleracea Bo4g083590 N 0.000
Bostr.10040s0256 Boechera stricta Bostr.10040s0256 N 0.000
Bra035427 Brassica rapa Bra035427 N 0.000
BRADI4G17410 Brachypodium distachyon BRADI4G17410 I 0.000
cassava11453.m1 Manihot esculenta cassava11453.m1 N 0.000
cassava11454.m1 Manihot esculenta cassava11454.m1 N 0.000
cassava11455.m1 Manihot esculenta cassava11455.m1 N 0.000
cassava11456.m1 Manihot esculenta cassava11456.m1 N 0.000
cassava7098.valid.m1 Manihot esculenta cassava7098.valid.m1 N 0.000
cassava7099.valid.m1 Manihot esculenta cassava7099.valid.m1 N 0.000
Ciclev10000491m.g Citrus clementina Ciclev10000491m.g N 0.000
Cla001927 Citrullus lanatus Cla001927 N 0.000
Cucsa.183410 Cucumis sativus Cucsa.183410 N 0.000
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.000
GLYMA07G40270 Glycine max GLYMA07G40270 N 0.000
LPERR01G37140 Leersia perrieri LPERR01G37140 N 0.000
Lus10007440.g Linum usitatissimum Lus10007440.g N 0.000
Lus10024455.g Linum usitatissimum Lus10024455.g N 0.000
mgf006427m Mimulus guttatus mgf006427m N 0.000
mgf024961m Mimulus guttatus mgf024961m N 0.000
MLOC_18401 Hordeum vulgare MLOC_18401 N 0.000
OB01G51580 Oryza brachyantha OB01G51580 N 0.000
OBART12G11990 Oryza barthii OBART12G11990 N 0.000
OGLUM12G13560 Oryza glumaepatula OGLUM12G13560 N 0.000
OLONG_010675 Oryza longistaminata OLONG_010675 N 0.000
OLONG_019549 Oryza longistaminata OLONG_019549 N 0.000
OMERI12G08550 Oryza meridionalis OMERI12G08550 N 0.000
ONIVA12G12070 Oryza nivara ONIVA12G12070 N 0.000
OPUNC12G10620 Oryza punctata OPUNC12G10620 N 0.000
ORGLA12G0109100 Oryza glaberrima ORGLA12G0109100 N 0.000
ORUFI12G13110 Oryza rufipogon ORUFI12G13110 N 0.000
PRUPE_ppa002394mg Prunus persica PRUPE_ppa002394mg N 0.000
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.000
Sb05g019540 Sorghum bicolor Sb05g019540 N 0.000
Si025988m.g Setaria italica Si025988m.g N 0.000
Solyc01g103050.2 Solanum lycopersicum Solyc01g103050.2 N 0.000
TCM_027113 Theobroma cacao TCM_027113 I 0.000
Thhalv10023326m.g Eutrema salsugineum Thhalv10023326m.g N 0.000
TRAES3BF111600210CFD_g Triticum aestivum TRAES3BF111600210CFD_g N 0.000
TRIUR3_02890 Triticum urartu TRIUR3_02890 N 0.000