Thhalv10023390m.g (Eutrema salsugineum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Thhalv10023390m.g T357036_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY6
M07377_2.00
Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG

CGTTGACYNDNDHNDNNNH
Dap-seq
OMalley et al.(2016)
WRKY6_col_a
0.907 0.983
WRKY6
M07378_2.00
Arabidopsis thaliana
NNHNWRGTCAACKNH

DNMGTTGACYWNDNN
Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a
0.907 0.983
WRKY42
M07404_2.00
Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN

NNDNNHNNNNHGTTGACYWHN
Dap-seq
OMalley et al.(2016)
WRKY42_col_a
0.897 0.949
WRKY42
M07405_2.00
Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD

HHNDNMGTTGACYWNNNHND
Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a
0.897 0.949
WRKY31
M07408_2.00
Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG

CGTTGACYHNNNNNDNNNN
Dap-seq
OMalley et al.(2016)
WRKY31_col_a
0.896 0.966
WRKY31
M07409_2.00
Arabidopsis thaliana
NHWRGTCAACKNH

DNMGTTGACYWDN
Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a
0.896 0.966
WRKY47
M00732_2.00
Arabidopsis thaliana
NNRGTCAACKN

NMGTTGACYNN
PBM
Chang et al.(2013)
pTH7913
0.892 0.898
WRKY47
M07402_2.00
Arabidopsis thaliana
WRGTCAAMGNHVDK

MHBDNCKTTGACYW
Dap-seq
OMalley et al.(2016)
WRKY47_col_a
0.892 0.898
WRKY47
M07403_2.00
Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN

NNNNDNMGTTGACYWDNNN
Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a
0.892 0.898
WRKY21
M02553_2.00
Arabidopsis thaliana
NNRGTCAAMN

NKTTGACYNN
PBM
Weirauch et al.(2014)
pTH7422
0.809 0.576
WRKY21
M07389_2.00
Arabidopsis thaliana
HAAAGTCAACNNH

DNNGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a
0.809 0.576
WRKY21
M07390_2.00
Arabidopsis thaliana
HAAAGTCAACK

MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_col
0.809 0.576
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10023390m WRKY 310 368

Links

Other WRKY family TFs
Other Eutrema salsugineum TFs

681 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R009653 Calypte anna Aan_R009653 I 0.000
Alligator_sinensis_CCG008426.1 Alligator sinensis Alligator_sinensis_CCG008426.1 I 0.000
CAB44731 Xenopus laevis CAB44731 I 0.000
Cmyd_10016714 Chelonia mydas Cmyd_10016714 I 0.000
ENSACAG00000016455 Anolis carolinensis ENSACAG00000016455 I 0.000
ENSAMEG00000007498 Ailuropoda melanoleuca ENSAMEG00000007498 I 0.000
ENSAMEG00000018266 Ailuropoda melanoleuca ENSAMEG00000018266 I 0.000
ENSAMXG00000003465 Astyanax mexicanus ENSAMXG00000003465 I 0.000
ENSAPLG00000010851 Anas platyrhynchos ENSAPLG00000010851 I 0.000
ENSBTAP00000000009-D1 Bos grunniens ENSBTAP00000000009-D1 I 0.000
ENSCSAG00000003141 Chlorocebus sabaeus ENSCSAG00000003141 I 0.000
ENSCSAG00000007180 Chlorocebus sabaeus ENSCSAG00000007180 I 0.000
ENSFALG00000006654 Ficedula albicollis ENSFALG00000006654 I 0.000
ENSGALG00000005728 Gallus gallus ENSGALG00000005728 I 0.000
ENSGMOG00000003941 Gadus morhua ENSGMOG00000003941 I 0.000
ENSLACG00000014221 Latimeria chalumnae ENSLACG00000014221 I 0.000
ENSLOCG00000001042 Lepisosteus oculatus ENSLOCG00000001042 I 0.000
ENSMEUG00000008968 Macropus eugenii ENSMEUG00000008968 I 0.000
ENSMICG00000000836 Microcebus murinus ENSMICG00000000836 I 0.000
ENSMMUG00000019503 Macaca mulatta ENSMMUG00000019503 I 0.000
ENSMPUG00000000392 Mustela putorius furo ENSMPUG00000000392 I 0.000
ENSMPUG00000008619 Mustela putorius furo ENSMPUG00000008619 I 0.000
ENSONIG00000005638 Oreochromis niloticus ENSONIG00000005638 I 0.000
ENSP00000262426 Macaca fascicularis ENSP00000262426 I 0.000
ENSPANG00000006104 Papio anubis ENSPANG00000006104 I 0.000
ENSPFOG00000017654 Poecilia formosa ENSPFOG00000017654 I 0.000
ENSPPYG00000007623 Pongo abelii ENSPPYG00000007623 I 0.000
ENSPSIG00000004712 Pelodiscus sinensis ENSPSIG00000004712 I 0.000
ENSSHAG00000012720 Sarcophilus harrisii ENSSHAG00000012720 I 0.000
ENSSHAG00000012906 Sarcophilus harrisii ENSSHAG00000012906 I 0.000
ENSSSCG00000000992 Sus scrofa ENSSSCG00000000992 I 0.000
ENSSTOG00000020735 Ictidomys tridecemlineatus ENSSTOG00000020735 I 0.000
ENSXMAG00000003079 Xiphophorus maculatus ENSXMAG00000003079 I 0.000
fgenesh2_pg.scaffold_6000134 Branchiostoma floridae fgenesh2_pg.scaffold_6000134 I 0.000
FOXF1 Meleagris gallopavo ENSMGAG00000017424 I 0.000
FOXF1 Canis familiaris ENSCAFG00000019918 I 0.000
foxf1 Oryzias latipes ENSORLG00000009476 I 0.000
foxf1 Danio rerio ENSDARG00000015399 I 0.000
FOXF1 Procavia capensis ENSPCAG00000004953 N 0.000
FOXF1 Cavia porcellus ENSCPOG00000000954 I 0.000
FOXF1 Callithrix jacchus ENSCJAG00000017152 I 0.000
foxf1 Xenopus tropicalis XB-GENE-478922 I 0.000
FOXF1 Pan troglodytes ENSPTRG00000008439 I 0.000
FOXF1 Bos taurus ENSBTAG00000000009 I 0.000
FOXF1 Pteropus vampyrus ENSPVAG00000007544 I 0.000
FOXF1 Equus caballus ENSECAG00000020094 I 0.000
FOXF1 Otolemur garnettii ENSOGAG00000011910 I 0.000
FOXF1 Loxodonta africana ENSLAFG00000002036 I 0.000
foxf1 Gasterosteus aculeatus ENSGACG00000015956 I 0.000
FOXF1 Homo sapiens ENSG00000103241 D 0.000
FOXF1 Felis catus ENSFCAG00000030557 I 0.000
Foxf1 Mus musculus ENSMUSG00000042812 I 0.000
FOXF1 Ornithorhynchus anatinus ENSOANG00000007633 I 0.000
FOXF1 Tursiops truncatus ENSTTRG00000005881 I 0.000
FOXF1 Oryctolagus cuniculus ENSOCUG00000001701 I 0.000
foxf1 Tetraodon nigroviridis ENSTNIG00000009284 I 0.000
FOXF1 Erinaceus europaeus ENSEEUG00000002843 I 0.000
Foxf1 Rattus norvegicus ENSRNOG00000049906 I 0.000
foxf1.L Xenopus laevis XB-GENE-865226 I 0.000
foxf1.S Xenopus laevis XB-GENE-6254084 I 0.000
FOXF2 Pteropus vampyrus ENSPVAG00000013383 I 0.000
FOXF2 Oryctolagus cuniculus ENSOCUG00000013970 I 0.000
FOXF2 Callithrix jacchus ENSCJAG00000019592 I 0.000
FOXF2 Canis familiaris ENSCAFG00000009195 I 0.000
Foxf2 Dipodomys ordii ENSDORG00000001552 I 0.000
FOXF2 Felis catus ENSFCAG00000005901 I 0.000
FOXF2 Homo sapiens ENSG00000137273 D 0.000
FOXF2 Loxodonta africana ENSLAFG00000002074 I 0.000
FOXF2 Monodelphis domestica ENSMODG00000008307 I 0.000
Foxf2 Mus musculus ENSMUSG00000038402 I 0.000
FOXF2 Ornithorhynchus anatinus ENSOANG00000015736 I 0.000
FOXF2 Otolemur garnettii ENSOGAG00000005954 I 0.000
FOXF2 Ochotona princeps ENSOPRG00000010077 I 0.000
FOXF2 Myotis lucifugus ENSMLUG00000030088 I 0.000
FOXF2 Pan troglodytes ENSPTRG00000017662 I 0.000
FOXF2 Dasypus novemcinctus ENSDNOG00000031153 I 0.000
Gfo_R000500 Geospiza fortis Gfo_R000500 I 0.000
Gfo_R003355 Geospiza fortis Gfo_R003355 I 0.000
LDEC015330 Leptinotarsa decemlineata LDEC015330 I 0.000
Myotis_brandtii_FOXF1_10035307 Myotis brandtii Myotis_brandtii_FOXF1_10035307 I 0.000
Myotis_brandtii_Foxf2_10020358 Myotis brandtii Myotis_brandtii_Foxf2_10020358 I 0.000
Ogr05779 Ophisaurus gracilis Ogr05779 I 0.000
Ogr08842 Ophisaurus gracilis Ogr08842 I 0.000
Pvit_05670 Pogona vitticeps Pvit_05670 I 0.000
Pvit_16864 Pogona vitticeps Pvit_16864 I 0.000
Sakowv30034885m.g Saccoglossus kowalevskii Sakowv30034885m.g I 0.000