chr1.CM0032.340.nd (Lotus japonicus)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 chr1.CM0032.340.nd T357103_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25870.1
M01325_2.00 		Cannabis sativa
NRGTCAAM
KTTGACYN		 PBM
Lambert et al.(2019)
pTH10156 		0.859 0.845
WRKY51
M02568_2.00 		Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7478 		0.856 0.828
WRKY50
M07424_2.00 		Arabidopsis thaliana
NNAAAAGTCAAMN
NKTTGACTTTTNN		 Dap-seq
OMalley et al.(2016)
WRKY50_col_a 		0.823 0.759
WRKY50
M07425_2.00 		Arabidopsis thaliana
NWAAGTCAANN
NNTTGACTTWN		 Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a 		0.823 0.759
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0032.340.nd WRKY 95 152

Links

Other WRKY family TFs
Other Lotus japonicus TFs

276 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA05G31800 Glycine max GLYMA05G31800 I 0.868
GLYMA04G39650 Glycine max GLYMA04G39650 I 0.867
Bra024328 Brassica rapa Bra024328 I 0.865
MTR_8g092010 Medicago truncatula MTR_8g092010 I 0.865
Bo3g100860 Brassica oleracea Bo3g100860 I 0.863
Thhalv10004930m.g Eutrema salsugineum Thhalv10004930m.g I 0.860
Bo9g018440 Brassica oleracea Bo9g018440 I 0.859
Cagra.2438s0022 Capsella grandiflora Cagra.2438s0022 I 0.859
Bra037796 Brassica rapa Bra037796 I 0.859
PK25870.1 Cannabis sativa PK25870.1 D 0.859
Carubv10027178m.g Capsella rubella Carubv10027178m.g I 0.859
PRUPE_ppa015480mg Prunus persica PRUPE_ppa015480mg I 0.859
GLYMA08G15050 Glycine max GLYMA08G15050 I 0.859
TCM_001265 Theobroma cacao TCM_001265 I 0.858
Cucsa.250350 Cucumis sativus Cucsa.250350 I 0.857
cassava14063.valid.m1 Manihot esculenta cassava14063.valid.m1 I 0.857
SapurV1A.0594s0120 Salix purpurea SapurV1A.0594s0120 I 0.857
Gorai.007G245200 Gossypium raimondii Gorai.007G245200 I 0.857
cassava14062.valid.m1 Manihot esculenta cassava14062.valid.m1 I 0.857
Eucgr.I00316 Eucalyptus grandis Eucgr.I00316 I 0.856
Bra031900 Brassica rapa Bra031900 I 0.856
Bo2g166420 Brassica oleracea Bo2g166420 I 0.856
WRKY51 Arabidopsis thaliana AT5G64810 D 0.856
POPTR_0007s06720 Populus trichocarpa POPTR_0007s06720 I 0.856
VIT_07s0031g01710 Vitis vinifera VIT_07s0031g01710 I 0.856
WRKY51 Arabidopsis lyrata fgenesh2_kg.8__2513__AT5G64810.1 I 0.856
MDP0000253189 Malus domestica MDP0000253189 I 0.855
GLYMA06G15220 Glycine max GLYMA06G15220 I 0.854
MTR_3g095040 Medicago truncatula MTR_3g095040 I 0.854
Ca_04141 Cicer arietinum Ca_04141 I 0.854
Gorai.003G047800 Gossypium raimondii Gorai.003G047800 I 0.853
Aquca_014_00461 Aquilegia coerulea Aquca_014_00461 I 0.853
Solyc04g051690.2 Solanum lycopersicum Solyc04g051690.2 I 0.853
Eucgr.I00317 Eucalyptus grandis Eucgr.I00317 I 0.851
POPTR_0005s08720 Populus trichocarpa POPTR_0005s08720 I 0.851
Bostr.0568s0314 Boechera stricta Bostr.0568s0314 I 0.850
Pm001825 Prunus mume Pm001825 I 0.849
Ciclev10026733m.g Citrus clementina Ciclev10026733m.g I 0.849
PDK_20s1331611g001 Phoenix dactylifera PDK_20s1331611g001 I 0.849
BRADI2G48090 Brachypodium distachyon BRADI2G48090 I 0.849
orange1.1g029257m.g Citrus sinensis orange1.1g029257m.g I 0.849
LPERR01G24650 Leersia perrieri LPERR01G24650 I 0.848
Traes_3DL_DF0D3F3FE Triticum aestivum Traes_3DL_DF0D3F3FE I 0.847
Pavir.Ea02619 Panicum virgatum Pavir.Ea02619 I 0.847
TRIUR3_33662 Triticum urartu TRIUR3_33662 I 0.847
Cucsa.101530 Cucumis sativus Cucsa.101530 I 0.847
TRAES3BF111700140CFD_g Triticum aestivum TRAES3BF111700140CFD_g I 0.847
Si004464m.g Setaria italica Si004464m.g I 0.847
GSMUA_Achr3G20450_001 Musa acuminata GSMUA_Achr3G20450_001 I 0.846
PDK_20s1512971g002 Phoenix dactylifera PDK_20s1512971g002 I 0.845
OBART01G28780 Oryza barthii OBART01G28780 I 0.845
ORGLA01G0238400 Oryza glaberrima ORGLA01G0238400 I 0.845
BGIOSGA000921 Oryza indica BGIOSGA000921 I 0.845
GRMZM5G863420 Zea mays GRMZM5G863420 I 0.845
ORUFI01G31840 Oryza rufipogon ORUFI01G31840 I 0.845
OBART01G28750 Oryza barthii OBART01G28750 I 0.845
OPUNC01G28510 Oryza punctata OPUNC01G28510 I 0.845
OS01G0714800 Oryza sativa OS01G0714800 I 0.845
OGLUM01G32750 Oryza glumaepatula OGLUM01G32750 I 0.845
OMERI01G26280 Oryza meridionalis OMERI01G26280 I 0.845
Sb03g032800 Sorghum bicolor Sb03g032800 I 0.844
GRMZM2G101405 Zea mays GRMZM2G101405 I 0.844
AMTR_s00078p00145410 Amborella trichopoda AMTR_s00078p00145410 I 0.843
OB05G31630 Oryza brachyantha OB05G31630 I 0.843
SapurV1A.0318s0110 Salix purpurea SapurV1A.0318s0110 I 0.843
Lus10006848.g Linum usitatissimum Lus10006848.g I 0.843
Pavir.Eb02766 Panicum virgatum Pavir.Eb02766 I 0.843
OS05G0537100 Oryza sativa OS05G0537100 I 0.842
ORUFI05G25660 Oryza rufipogon ORUFI05G25660 I 0.842
Pavir.Ca01747 Panicum virgatum Pavir.Ca01747 I 0.842
TRAES3BF066700160CFD_g Triticum aestivum TRAES3BF066700160CFD_g I 0.842
Si023194m.g Setaria italica Si023194m.g I 0.842
Sb09g026830 Sorghum bicolor Sb09g026830 I 0.842
Traes_1DL_D550418641 Triticum aestivum Traes_1DL_D550418641 I 0.842
BGIOSGA020266 Oryza indica BGIOSGA020266 I 0.842
OPUNC05G21470 Oryza punctata OPUNC05G21470 I 0.842
OBART05G24090 Oryza barthii OBART05G24090 I 0.842
Pavir.J03284 Panicum virgatum Pavir.J03284 I 0.842
OMERI01G26720 Oryza meridionalis OMERI01G26720 I 0.842
ONIVA05G24830 Oryza nivara ONIVA05G24830 I 0.842
29771.m000072 Ricinus communis 29771.m000072 I 0.842
LPERR05G19900 Leersia perrieri LPERR05G19900 I 0.842
BRADI2G18530 Brachypodium distachyon BRADI2G18530 I 0.842
F775_27801 Aegilops tauschii F775_27801 I 0.841
Si023279m.g Setaria italica Si023279m.g I 0.841
GRMZM2G057116 Zea mays GRMZM2G057116 I 0.841
LPERR05G04920 Leersia perrieri LPERR05G04920 I 0.841
Sb09g005700 Sorghum bicolor Sb09g005700 I 0.841
MLOC_10264 Hordeum vulgare MLOC_10264 I 0.841
MLOC_81131 Hordeum vulgare MLOC_81131 I 0.841
Pavir.J05732 Panicum virgatum Pavir.J05732 I 0.841
Pavir.Ca01028 Panicum virgatum Pavir.Ca01028 I 0.841
GSMUA_Achr7G09680_001 Musa acuminata GSMUA_Achr7G09680_001 I 0.840
TRIUR3_29978 Triticum urartu TRIUR3_29978 I 0.840
TRIUR3_01979 Triticum urartu TRIUR3_01979 I 0.840
Gorai.001G021500 Gossypium raimondii Gorai.001G021500 I 0.840
F775_52480 Aegilops tauschii F775_52480 I 0.840
Lus10036624.g Linum usitatissimum Lus10036624.g I 0.840
Lus10035841.g Linum usitatissimum Lus10035841.g I 0.840
MLOC_12079 Hordeum vulgare MLOC_12079 I 0.840
GRMZM2G137802 Zea mays GRMZM2G137802 I 0.840
Traes_1AS_1432A2F79 Triticum aestivum Traes_1AS_1432A2F79 I 0.840
TCM_035897 Theobroma cacao TCM_035897 I 0.840
TCM_037343 Theobroma cacao TCM_037343 I 0.840
OPUNC05G05190 Oryza punctata OPUNC05G05190 I 0.839
OS05G0183100 Oryza sativa OS05G0183100 I 0.839
Solyc08g062490.2 Solanum lycopersicum Solyc08g062490.2 I 0.839
BGIOSGA018676 Oryza indica BGIOSGA018676 I 0.839
ORUFI05G05890 Oryza rufipogon ORUFI05G05890 I 0.839
ORGLA05G0050000 Oryza glaberrima ORGLA05G0050000 I 0.839
SapurV1A.1151s0090 Salix purpurea SapurV1A.1151s0090 I 0.839
OBART05G05560 Oryza barthii OBART05G05560 I 0.839
BRADI2G05510 Brachypodium distachyon BRADI2G05510 I 0.839
OGLUM05G05440 Oryza glumaepatula OGLUM05G05440 I 0.839
VIT_04s0008g01470 Vitis vinifera VIT_04s0008g01470 I 0.839
OMERI05G05240 Oryza meridionalis OMERI05G05240 I 0.839
ONIVA05G06030 Oryza nivara ONIVA05G06030 I 0.839
OB05G15280 Oryza brachyantha OB05G15280 I 0.839
LPERR01G05270 Leersia perrieri LPERR01G05270 I 0.839
Solyc04g072070.2 Solanum lycopersicum Solyc04g072070.2 I 0.838
evm.TU.supercontig_919.2 Carica papaya evm.TU.supercontig_919.2 I 0.838
POPTR_0006s24050 Populus trichocarpa POPTR_0006s24050 I 0.838
PGSC0003DMG401031196 Solanum tuberosum PGSC0003DMG401031196 I 0.838
BRADI2G33540 Brachypodium distachyon BRADI2G33540 I 0.837
Cla022318 Citrullus lanatus Cla022318 I 0.837
F775_19446 Aegilops tauschii F775_19446 I 0.837
PGSC0003DMG400033177 Solanum tuberosum PGSC0003DMG400033177 I 0.837
TRAES3BF267200010CFD_g Triticum aestivum TRAES3BF267200010CFD_g I 0.837
Sb03g003360 Sorghum bicolor Sb03g003360 I 0.837
GRMZM2G163054 Zea mays GRMZM2G163054 I 0.837
OPUNC01G05450 Oryza punctata OPUNC01G05450 I 0.836
Si002621m.g Setaria italica Si002621m.g I 0.836
Pavir.J08526 Panicum virgatum Pavir.J08526 I 0.836
BGIOSGA002237 Oryza indica BGIOSGA002237 I 0.836
OGLUM01G06090 Oryza glumaepatula OGLUM01G06090 I 0.836
ONIVA01G06360 Oryza nivara ONIVA01G06360 I 0.836
OMERI01G05840 Oryza meridionalis OMERI01G05840 I 0.836
MTR_1g015140 Medicago truncatula MTR_1g015140 I 0.836
GRMZM2G475984 Zea mays GRMZM2G475984 I 0.836
OS01G0186000 Oryza sativa OS01G0186000 I 0.836
mgf026356m Mimulus guttatus mgf026356m I 0.836
ORUFI01G06050 Oryza rufipogon ORUFI01G06050 I 0.836
ORGLA01G0052400 Oryza glaberrima ORGLA01G0052400 I 0.836
GRMZM2G516301 Zea mays GRMZM2G516301 I 0.836
Pavir.Ea00274 Panicum virgatum Pavir.Ea00274 I 0.836
GLYMA04G05700 Glycine max GLYMA04G05700 I 0.835
Pm005548 Prunus mume Pm005548 I 0.835
Eucgr.C00675 Eucalyptus grandis Eucgr.C00675 I 0.835
Solyc12g056750.1 Solanum lycopersicum Solyc12g056750.1 I 0.835
PGSC0003DMG400023196 Solanum tuberosum PGSC0003DMG400023196 I 0.835
Gorai.010G098000 Gossypium raimondii Gorai.010G098000 I 0.834
Traes_1AL_9ADA7A031 Triticum aestivum Traes_1AL_9ADA7A031 I 0.834
Bra009885 Brassica rapa Bra009885 I 0.834
PK29640.1 Cannabis sativa PK29640.1 I 0.834
Bo9g011080 Brassica oleracea Bo9g011080 I 0.834
PDK_20s1384091g002 Phoenix dactylifera PDK_20s1384091g002 I 0.834
Gorai.010G131300 Gossypium raimondii Gorai.010G131300 I 0.833
Ciclev10009761m.g Citrus clementina Ciclev10009761m.g I 0.833
orange1.1g031482m.g Citrus sinensis orange1.1g031482m.g I 0.833
Gorai.011G114200 Gossypium raimondii Gorai.011G114200 I 0.832
VIT_04s0069g00970 Vitis vinifera VIT_04s0069g00970 I 0.832
MTR_3g104750 Medicago truncatula MTR_3g104750 I 0.832
PGSC0003DMG400031140 Solanum tuberosum PGSC0003DMG400031140 I 0.832
cassava28704.m1 Manihot esculenta cassava28704.m1 I 0.832
VIT_04s0069g00980 Vitis vinifera VIT_04s0069g00980 I 0.831
29739.m003586 Ricinus communis 29739.m003586 I 0.831
MDP0000480547 Malus domestica MDP0000480547 I 0.831
gene22024-v1.0-hybrid Fragaria vesca gene22024-v1.0-hybrid I 0.831
Sb03g026170 Sorghum bicolor Sb03g026170 I 0.831
LjSGA_012799.2 Lotus japonicus LjSGA_012799.2 I 0.830
Bo7g095430 Brassica oleracea Bo7g095430 I 0.830
OB01G37710 Oryza brachyantha OB01G37710 I 0.830
F775_44085 Aegilops tauschii F775_44085 I 0.830
evm.TU.supercontig_126.49 Carica papaya evm.TU.supercontig_126.49 I 0.830
Cagra.0998s0013 Capsella grandiflora Cagra.0998s0013 I 0.829
28644.m000915 Ricinus communis 28644.m000915 I 0.829
cassava10657.m1 Manihot esculenta cassava10657.m1 I 0.829
Carubv10002099m.g Capsella rubella Carubv10002099m.g I 0.829
GLYMA06G05721 Glycine max GLYMA06G05721 I 0.828
Gorai.009G259600 Gossypium raimondii Gorai.009G259600 I 0.828
Bostr.29827s0201 Boechera stricta Bostr.29827s0201 I 0.828
Si002862m.g Setaria italica Si002862m.g I 0.827
Ca_09134 Cicer arietinum Ca_09134 I 0.827
GSMUA_Achr8G26240_001 Musa acuminata GSMUA_Achr8G26240_001 I 0.827
ORUFI01G23500 Oryza rufipogon ORUFI01G23500 I 0.826
LPERR01G17790 Leersia perrieri LPERR01G17790 I 0.826
BGIOSGA003851 Oryza indica BGIOSGA003851 I 0.826
OLONG_016272 Oryza longistaminata OLONG_016272 I 0.826
ONIVA01G23410 Oryza nivara ONIVA01G23410 I 0.826
OPUNC01G20950 Oryza punctata OPUNC01G20950 I 0.826
OMERI01G18980 Oryza meridionalis OMERI01G18980 I 0.826
OGLUM01G24490 Oryza glumaepatula OGLUM01G24490 I 0.826
OBART01G20830 Oryza barthii OBART01G20830 I 0.826
OS01G0584900 Oryza sativa OS01G0584900 I 0.826
GLYMA17G34210 Glycine max GLYMA17G34210 I 0.825
Pavir.Ea02041 Panicum virgatum Pavir.Ea02041 I 0.825
Thhalv10005029m.g Eutrema salsugineum Thhalv10005029m.g I 0.824
Pavir.Eb02454 Panicum virgatum Pavir.Eb02454 I 0.824
Bra020546 Brassica rapa Bra020546 I 0.824
Bo2g155960 Brassica oleracea Bo2g155960 I 0.824
PDK_20s1746561g001 Phoenix dactylifera PDK_20s1746561g001 I 0.824
TRIUR3_24021 Triticum urartu TRIUR3_24021 I 0.823
WRKY50 Arabidopsis thaliana AT5G26170 D 0.823
MDP0000121669 Malus domestica MDP0000121669 I 0.823
GSMUA_Achr7G23980_001 Musa acuminata GSMUA_Achr7G23980_001 I 0.821
chr4.CM0333.60.nd Lotus japonicus chr4.CM0333.60.nd I 0.818
WRKY50 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6002222 I 0.817
mgf023486m Mimulus guttatus mgf023486m I 0.817
GSMUA_Achr10G00810_001 Musa acuminata GSMUA_Achr10G00810_001 I 0.816
GSMUA_Achr7G15060_001 Musa acuminata GSMUA_Achr7G15060_001 I 0.816
GSMUA_AchrUn_randomG18710_001 Musa acuminata GSMUA_AchrUn_randomG18710_001 I 0.816
GLYMA07G16040 Glycine max GLYMA07G16040 I 0.815
Pm002679 Prunus mume Pm002679 I 0.815
Cla018477 Citrullus lanatus Cla018477 I 0.815
WRKY49 Vitis vinifera VIT_08s0007g00570 I 0.815
PRUPE_ppa019550mg Prunus persica PRUPE_ppa019550mg I 0.815
gene18438-v1.0-hybrid Fragaria vesca gene18438-v1.0-hybrid I 0.815
TCM_014419 Theobroma cacao TCM_014419 I 0.815
TCM_021911 Theobroma cacao TCM_021911 I 0.815
Ciclev10013616m.g Citrus clementina Ciclev10013616m.g I 0.815
PGSC0003DMG400007788 Solanum tuberosum PGSC0003DMG400007788 I 0.815
Cucsa.066300 Cucumis sativus Cucsa.066300 I 0.815
chr1.CM0147.890.nc Lotus japonicus chr1.CM0147.890.nc I 0.815
GSMUA_Achr2G16390_001 Musa acuminata GSMUA_Achr2G16390_001 I 0.815
GLYMA14G11440 Glycine max GLYMA14G11440 I 0.815
Si005025m.g Setaria italica Si005025m.g I 0.815
GLYMA18G39970 Glycine max GLYMA18G39970 I 0.815
orange1.1g038951m.g Citrus sinensis orange1.1g038951m.g I 0.814
MTR_7g062220 Medicago truncatula MTR_7g062220 I 0.814
GSMUA_Achr8G02180_001 Musa acuminata GSMUA_Achr8G02180_001 I 0.814
GLYMA08G01430 Glycine max GLYMA08G01430 I 0.814
Gorai.012G104800 Gossypium raimondii Gorai.012G104800 I 0.813
WRKY49 Arabidopsis thaliana AT5G43290 I 0.813
chr1.CM0133.390.nc Lotus japonicus chr1.CM0133.390.nc I 0.813
SELMODRAFT_29247 Selaginella moellendorffii SELMODRAFT_29247 I 0.813
SELMODRAFT_18136 Selaginella moellendorffii SELMODRAFT_18136 I 0.813
Sb03g047350 Sorghum bicolor Sb03g047350 I 0.813
AC165171.2_FG002 Zea mays AC165171.2_FG002 I 0.813
MDP0000205962 Malus domestica MDP0000205962 I 0.812
Pavir.Ea04136 Panicum virgatum Pavir.Ea04136 I 0.812
MDP0000255768 Malus domestica MDP0000255768 I 0.812
LPERR01G39910 Leersia perrieri LPERR01G39910 I 0.812
Eucgr.K03115 Eucalyptus grandis Eucgr.K03115 I 0.812
Bo6g051390 Brassica oleracea Bo6g051390 I 0.811
Bra037106 Brassica rapa Bra037106 I 0.811
BGIOSGA000506 Oryza indica BGIOSGA000506 I 0.811
OPUNC01G35780 Oryza punctata OPUNC01G35780 I 0.811
LPERR01G31730 Leersia perrieri LPERR01G31730 I 0.811
OB01G45670 Oryza brachyantha OB01G45670 I 0.811
OGLUM01G40860 Oryza glumaepatula OGLUM01G40860 I 0.811
Carubv10026841m.g Capsella rubella Carubv10026841m.g I 0.810
OGLUM01G49890 Oryza glumaepatula OGLUM01G49890 I 0.810
Al_scaffold_0008_672 Arabidopsis lyrata Al_scaffold_0008_672 I 0.810
OBART01G45510 Oryza barthii OBART01G45510 I 0.810
Cagra.9063s0001 Capsella grandiflora Cagra.9063s0001 I 0.810
OS01G0972800 Oryza sativa OS01G0972800 I 0.810
Bostr.3148s0146 Boechera stricta Bostr.3148s0146 I 0.810
ORGLA01G0392700 Oryza glaberrima ORGLA01G0392700 I 0.810
ONIVA01G51790 Oryza nivara ONIVA01G51790 I 0.810
OPUNC01G44450 Oryza punctata OPUNC01G44450 I 0.810
fgenesh2_kg.97__1__AT5G43290.1 Arabidopsis lyrata fgenesh2_kg.97__1__AT5G43290.1 I 0.810
WRKY10 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1004208 I 0.810
scaffold_800733.1 Arabidopsis lyrata scaffold_800733.1 I 0.810
scaffold_9700001.1 Arabidopsis lyrata scaffold_9700001.1 I 0.810
OMERI01G42290 Oryza meridionalis OMERI01G42290 I 0.810
OB01G30460 Oryza brachyantha OB01G30460 I 0.810
PDK_20s1808251g006 Phoenix dactylifera PDK_20s1808251g006 I 0.810
Sb03g039550 Sorghum bicolor Sb03g039550 I 0.810
BGIOSGA005267 Oryza indica BGIOSGA005267 I 0.810
ORUFI01G49010 Oryza rufipogon ORUFI01G49010 I 0.810
AMTR_s00012p00243090 Amborella trichopoda AMTR_s00012p00243090 I 0.809
SapurV1A.0001s1670 Salix purpurea SapurV1A.0001s1670 I 0.809
SELMODRAFT_69405 Selaginella moellendorffii SELMODRAFT_69405 I 0.809
SELMODRAFT_18126 Selaginella moellendorffii SELMODRAFT_18126 I 0.809
Thhalv10003250m.g Eutrema salsugineum Thhalv10003250m.g I 0.809
mgf019359m Mimulus guttatus mgf019359m I 0.808