chr4.CM0227.580.nc (Lotus japonicus)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 chr4.CM0227.580.nc T357123_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY2
M02567_2.00
Arabidopsis thaliana
BRGTCAAM

KTTGACYV
PBM
Weirauch et al.(2014)
pTH8832
0.817 0.626
WRKY3
M07381_2.00
Arabidopsis thaliana
MAWAGTCAAMR

YKTTGACTWTK
Dap-seq
OMalley et al.(2016)
WRKY3_col_a
0.812 0.643
ZAP1
M02726_2.00
Arabidopsis thaliana
DRCKCGGTCAA

TTGACCGMGYH
SELEX
Mathelier et al.(2014)
MA0589.1
0.812 0.513
ZAP1
M11463_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ZAP1_01
0.812 0.513
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr4.CM0227.580.nc WRKY 35 91
chr4.CM0227.580.nc WRKY 177 234

Links

Other WRKY family TFs
Other Lotus japonicus TFs

Invalid Input OrderBy

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action