chr5.CM0852.80.nd (Lotus japonicus)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 chr5.CM0852.80.nd T357132_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY15
M02549_2.00
Arabidopsis thaliana
NRGTCAAMNN

NNKTTGACYN
PBM
Weirauch et al.(2014)
pTH7602
0.887 0.898
WRKY15
M07383_2.00
Arabidopsis thaliana
AAAAGTCAACKN

NMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY15_colamp_a
0.887 0.898
WRKY15
M07384_2.00
Arabidopsis thaliana
NWAAGTCAACB

VGTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY15_col_b
0.887 0.898
Q40828_PETCR
M11467_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY_Q2
0.885 0.898
WRKY17
M02550_2.00
Arabidopsis thaliana
NNDGTCAAHN

NDTTGACHNN
PBM
Weirauch et al.(2014)
pTH8088
0.882 0.864
WRKY17
M07385_2.00
Arabidopsis thaliana
NHAAAGTCAACRNN

NNYGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY17_col_a
0.882 0.864
WRKY17
M07386_2.00
Arabidopsis thaliana
NMAAAGTCAACGN

NCGTTGACTTTKN
Dap-seq
OMalley et al.(2016)
WRKY17_colamp_a
0.882 0.864
WRKY11
M02559_2.00
Arabidopsis thaliana
NDGTCAAHNN

NNDTTGACHN
PBM
Weirauch et al.(2014)
pTH8091
0.880 0.847
WRKY11
M07415_2.00
Arabidopsis thaliana
NHAAAGTCAACBNH

DNVGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY11_col_a
0.880 0.847
WRKY11
M11464_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY11_Q2
0.880 0.847
WRKY7
M07412_2.00
Arabidopsis thaliana
NNDDDNNNNMAAAGTCAACGV

BCGTTGACTTTKNNNNHHHNN
Dap-seq
OMalley et al.(2016)
WRKY7_colamp_a
0.878 0.847
WRKY7
M07413_2.00
Arabidopsis thaliana
NAAAAGTCAACKNN

NNMGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY7_col
0.878 0.847
WRKY21
M02553_2.00
Arabidopsis thaliana
NNRGTCAAMN

NKTTGACYNN
PBM
Weirauch et al.(2014)
pTH7422
0.868 0.797
WRKY21
M07389_2.00
Arabidopsis thaliana
HAAAGTCAACNNH

DNNGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a
0.868 0.797
WRKY21
M07390_2.00
Arabidopsis thaliana
HAAAGTCAACK

MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_col
0.868 0.797
WRKY14
M00731_2.00
Arabidopsis thaliana
NRGTCAAMNN

NNKTTGACYN
PBM
Chang et al.(2013)
pTH7570
0.859 0.678
WRKY14
M07375_2.00
Arabidopsis thaliana
NAAAGTCAACGNN

NNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_col_a
0.859 0.678
WRKY14
M07376_2.00
Arabidopsis thaliana
NAAAGTCAACGNH

DNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_colamp_a
0.859 0.678
WRKY65
M07372_2.00
Arabidopsis thaliana
NWWAGTCAACG

CGTTGACTWWN
Dap-seq
OMalley et al.(2016)
WRKY65_col_a
0.857 0.661
WRKY65
M07373_2.00
Arabidopsis thaliana
NAAAGTCAACGN

NCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY65_colamp_a
0.857 0.661
WRKY27
M02566_2.00
Arabidopsis thaliana
NNGTCHDNN

NNHDGACNN
PBM
Weirauch et al.(2014)
pTH8188
0.856 0.627
WRKY27
M07430_2.00
Arabidopsis thaliana
MAAAGTCAACKNH

DNMGTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY27_col_a
0.856 0.627
WRKY27
M07431_2.00
Arabidopsis thaliana
HAAAGTCAACKNH

DNMGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY27_colamp_a
0.856 0.627
WRKY22
M02557_2.00
Arabidopsis thaliana
NNNKTMHDNN

NNHDKAMNNN
PBM
Weirauch et al.(2014)
pTH7320
0.849 0.627
WRKY22
M07400_2.00
Arabidopsis thaliana
AAAAGTCAACKNH

DNMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY22_colamp_a
0.849 0.627
WRKY22
M07401_2.00
Arabidopsis thaliana
NAAAGTCAACKNH

DNMGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY22_col
0.849 0.627
WRKY29
M02558_2.00
Arabidopsis thaliana
NNNGTCHDNN

NNHDGACNNN
PBM
Weirauch et al.(2014)
pTH9604
0.843 0.576
WRKY29
M07410_2.00
Arabidopsis thaliana
HAAAGTCAACK

MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY29_col_a
0.843 0.576
WRKY29
M07411_2.00
Arabidopsis thaliana
HWWAGTCAAMDNN

NNHKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY29_colamp_a
0.843 0.576
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN

NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.828 0.593
fgenesh1_pg.C_Chr_11.0001000193
M02570_2.00
Ostreococcus tauri
NRGTCARNN

NNYTGACYN
PBM
Weirauch et al.(2014)
pTH9432
0.826 0.610
WRKY48
M02565_2.00
Arabidopsis thaliana
NNVGTCADNN

NNHTGACBNN
PBM
Weirauch et al.(2014)
pTH7552
0.822 0.559
WRKY28
M07406_2.00
Arabidopsis thaliana
HAAAGTCAAMNNH

DNNKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY28_col_a
0.819 0.525
WRKY28
M07407_2.00
Arabidopsis thaliana
VAAAGTCAAMG

CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY28_colamp_a
0.819 0.525
WRKY8
M02564_2.00
Arabidopsis thaliana
NRGTCAAHN

NDTTGACYN
PBM
Weirauch et al.(2014)
pTH7554
0.819 0.508
WRKY8
M07428_2.00
Arabidopsis thaliana
NAAAAGTCAACRNHW

WDNYGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY8_colamp_a
0.819 0.508
WRKY8
M07429_2.00
Arabidopsis thaliana
NNVAAAGTCAACRNH

DNYGTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY8_col
0.819 0.508
WRKY71
M07374_2.00
Arabidopsis thaliana
HAAAGTCAAMN

NKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY71_col_a
0.819 0.525
WRKY57
M02547_2.00
Arabidopsis thaliana
NNRGTCAAHN

NDTTGACYNN
PBM
Weirauch et al.(2014)
pTH7917
0.817 0.525
WRKY23
M02556_2.00
Arabidopsis thaliana
RGTCAACG

CGTTGACY
PBM
Weirauch et al.(2014)
pTH7387
0.817 0.525
WRKY23
M01089_2.00
Arabidopsis thaliana
NRGTCAAM

KTTGACYN
PBM
Sullivan et al.(2014)
pTH7671
0.817 0.525
WRKY12
M00898_2.00
Arabidopsis thaliana
NHGGTCAACNN

NNGTTGACCDN
PBM
Franco-Zorrilla et al.(2014)
WRKY12
0.812 0.542
WRKY50
M07424_2.00
Arabidopsis thaliana
NNAAAAGTCAAMN

NKTTGACTTTTNN
Dap-seq
OMalley et al.(2016)
WRKY50_col_a
0.811 0.576
WRKY50
M07425_2.00
Arabidopsis thaliana
NWAAGTCAANN

NNTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a
0.811 0.576
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr5.CM0852.80.nd WRKY 291 349

Links

Other WRKY family TFs
Other Lotus japonicus TFs

1830 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CG11617 Drosophila melanogaster FBgn0031232 D 0.000
AGAP009986 Anopheles gambiae AGAP009986 D 0.000
ADIR009411 Anopheles dirus ADIR009411 I 0.000
ACUA004854 Anopheles culicifacies ACUA004854 I 0.000
ACOM029398 Anopheles coluzzii ACOM029398 I 0.000
ACHR006303 Anopheles christyi ACHR006303 I 0.000
AATE007266 Anopheles atroparvus AATE007266 I 0.000
PPAI010492 Phlebotomus papatasi PPAI010492 I 0.000
AALB000199 Anopheles albimanus AALB000199 I 0.000
LDEC020805 Leptinotarsa decemlineata LDEC020805 I 0.000
LCUP006842 Lucilia cuprina LCUP006842 I 0.000
HHAL004071-PA Halyomorpha halys HHAL004071-PA I 0.000
AEPI003053 Anopheles epiroticus AEPI003053 I 0.000
AFAF010217 Anopheles farauti AFAF010217 I 0.000
PPAI000128 Phlebotomus papatasi PPAI000128 I 0.000
MDOA011423 Musca domestica MDOA011423 I 0.000
LLOJ003912 Lutzomyia longipalpis LLOJ003912 I 0.000
ASTEI03992 Anopheles stephensi ASTEI03992 I 0.000
ASIS001422 Anopheles sinensis ASIS001422 I 0.000
AQUA009097 Anopheles quadriannulatus AQUA009097 I 0.000
AMIN006741 Anopheles minimus AMIN006741 I 0.000
AMEM004311 Anopheles merus AMEM004311 I 0.000
AMEC012450 Anopheles melas AMEC012450 I 0.000
CLEC006477 Cimex lectularius CLEC006477 I 0.000
YQE_07232 Dendroctonus ponderosae YQE_07232 I 0.000
TC013021 Tribolium castaneum TC013021 I 0.000
GI15136 Drosophila mojavensis FBgn0137886 I 0.000
GH10229 Drosophila grimshawi FBgn0117710 I 0.000
GG24672 Drosophila erecta FBgn0116803 I 0.000
GF24526 Drosophila ananassae FBgn0101520 I 0.000
GA11100 Drosophila pseudoobscura FBgn0071155 I 0.000
CPIJ003111 Culex quinquefasciatus CPIJ003111 I 0.000
BGIBMGA003176 Bombyx mori BGIBMGA003176 I 0.000
ADAC004105 Anopheles darlingi ADAC004105 I 0.000
AAEL010597 Aedes aegypti AAEL010597 I 0.000
GL25837 Drosophila persimilis FBgn0163421 I 0.000
GM16691 Drosophila sechellia FBgn0171604 I 0.000
RPRC001236 Rhodnius prolixus RPRC001236 I 0.000
PHUM462610 Pediculus humanus PHUM462610 I 0.000
MCINX012312 Melitaea cinxia MCINX012312 I 0.000
L798_14298 Zootermopsis nevadensis L798_14298 I 0.000
KGM_02032 Danaus plexippus KGM_02032 I 0.000
GE16360 Drosophila yakuba FBgn0233889 I 0.000
GK23761 Drosophila willistoni FBgn0225723 I 0.000
GJ17252 Drosophila virilis FBgn0204428 I 0.000
GD22979 Drosophila simulans FBgn0194371 I 0.000
CpipJ_CPIJ003111 Culex pipiens CpipJ_CPIJ003111 I 0.000