LjSGA_069579.1 (Lotus japonicus)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 LjSGA_069579.1 T357159_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN

NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.820 0.603
WRKY40
M02548_2.00
Arabidopsis thaliana
NRGTCAWN

NWTGACYN
PBM
Weirauch et al.(2014)
pTH8398
0.810 0.569
WRKY40
M07379_2.00
Arabidopsis thaliana
NNNAAAGTCAAVR

YBTTGACTTTNNN
Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a
0.810 0.569
WRKY40
M07380_2.00
Arabidopsis thaliana
NNVAAAGTCAAVRNH

DNYBTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY40_col
0.810 0.569
WRKY40
M08180_2.00
Arabidopsis thaliana
NNAGTCAANN

NNTTGACTNN
ChIP-seq
Mathelier et al.(2014)
MA1085.2
0.810 0.569
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_069579.1 WRKY 46 103

Links

Other WRKY family TFs
Other Lotus japonicus TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRMZM2G052671 Zea mays GRMZM2G052671 I 0.848
orange1.1g011483m.g Citrus sinensis orange1.1g011483m.g I 0.848
Pavir.Bb02418 Panicum virgatum Pavir.Bb02418 I 0.842
GRMZM2G151407 Zea mays GRMZM2G151407 I 0.842
Pavir.J40119 Panicum virgatum Pavir.J40119 I 0.842
Sb02g027950 Sorghum bicolor Sb02g027950 I 0.842
Si029342m.g Setaria italica Si029342m.g I 0.842
ONIVA04G13890 Oryza nivara ONIVA04G13890 I 0.842
GRMZM2G449681 Zea mays GRMZM2G449681 I 0.840
evm.TU.supercontig_12.196 Carica papaya evm.TU.supercontig_12.196 I 0.837
MLOC_67851 Hordeum vulgare MLOC_67851 I 0.836
chr2.CM0641.70.nc Lotus japonicus chr2.CM0641.70.nc I 0.836
GLYMA06G37100 Glycine max GLYMA06G37100 I 0.836
Lus10026409.g Linum usitatissimum Lus10026409.g I 0.835
Ca_13524 Cicer arietinum Ca_13524 I 0.832
OGLUM09G14860 Oryza glumaepatula OGLUM09G14860 I 0.831
OLONG_005396 Oryza longistaminata OLONG_005396 I 0.831
OBART09G14210 Oryza barthii OBART09G14210 I 0.831
ORUFI09G15250 Oryza rufipogon ORUFI09G15250 I 0.831
OB04G23060 Oryza brachyantha OB04G23060 I 0.831
MLOC_58019 Hordeum vulgare MLOC_58019 I 0.831
OS09G0481700 Oryza sativa OS09G0481700 I 0.831
BGIOSGA029574 Oryza indica BGIOSGA029574 I 0.831
OMERI09G11000 Oryza meridionalis OMERI09G11000 I 0.831
OPUNC09G12700 Oryza punctata OPUNC09G12700 I 0.831
ORGLA09G0109100 Oryza glaberrima ORGLA09G0109100 I 0.831
ONIVA09G14780 Oryza nivara ONIVA09G14780 I 0.831
Pavir.J13787 Panicum virgatum Pavir.J13787 I 0.828
Si031470m.g Setaria italica Si031470m.g I 0.826
GLYMA17G24700 Glycine max GLYMA17G24700 I 0.825
SELMODRAFT_59955 Selaginella moellendorffii SELMODRAFT_59955 I 0.824
GLYMA10G31413 Glycine max GLYMA10G31413 I 0.820
TRIUR3_16804 Triticum urartu TRIUR3_16804 I 0.820
Bo6g034690 Brassica oleracea Bo6g034690 I 0.820
Gorai.009G062400 Gossypium raimondii Gorai.009G062400 I 0.820
Bo6g051390 Brassica oleracea Bo6g051390 I 0.819
Bra037106 Brassica rapa Bra037106 I 0.819
MDP0000788581 Malus domestica MDP0000788581 I 0.819
evm.TU.supercontig_127.27 Carica papaya evm.TU.supercontig_127.27 I 0.819
Thhalv10012199m.g Eutrema salsugineum Thhalv10012199m.g I 0.819
MTR_1g077780 Medicago truncatula MTR_1g077780 I 0.818
TCM_036912 Theobroma cacao TCM_036912 I 0.818
GSMUA_Achr4G01930_001 Musa acuminata GSMUA_Achr4G01930_001 I 0.818
gene15013-v1.0-hybrid Fragaria vesca gene15013-v1.0-hybrid I 0.817
GSMUA_Achr2G16390_001 Musa acuminata GSMUA_Achr2G16390_001 I 0.817
MDP0000263349 Malus domestica MDP0000263349 I 0.817
Eucgr.C02659 Eucalyptus grandis Eucgr.C02659 I 0.816
Eucgr.F04317 Eucalyptus grandis Eucgr.F04317 I 0.816
WRKY10 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1004208 I 0.816
TRIUR3_10262 Triticum urartu TRIUR3_10262 I 0.816
Bra038006 Brassica rapa Bra038006 I 0.816
cassava18395.valid.m1 Manihot esculenta cassava18395.valid.m1 I 0.815
Cla022703 Citrullus lanatus Cla022703 I 0.815
TCM_035897 Theobroma cacao TCM_035897 I 0.815
Pm005697 Prunus mume Pm005697 I 0.814
cassava8103.valid.m1 Manihot esculenta cassava8103.valid.m1 I 0.814
evm.TU.supercontig_10.75 Carica papaya evm.TU.supercontig_10.75 I 0.814
MDP0000161881 Malus domestica MDP0000161881 I 0.813
OMERI04G23060 Oryza meridionalis OMERI04G23060 I 0.813
MDP0000228838 Malus domestica MDP0000228838 I 0.813
Solyc04g051690.2 Solanum lycopersicum Solyc04g051690.2 I 0.813
gw1.137.58.1 Physcomitrella patens gw1.137.58.1 I 0.813
MDP0000263961 Malus domestica MDP0000263961 I 0.813
Carubv10011619m.g Capsella rubella Carubv10011619m.g N 0.813
Traes_5AL_E566BD64E Triticum aestivum Traes_5AL_E566BD64E I 0.813
Cagra.0001s0017 Capsella grandiflora Cagra.0001s0017 I 0.813
Sb10g025600 Sorghum bicolor Sb10g025600 I 0.812
Cla019419 Citrullus lanatus Cla019419 I 0.812
Cucsa.197550 Cucumis sativus Cucsa.197550 I 0.812
EuGene.1200010296 Micromonas sp RCC299 EuGene.1200010296 I 0.812
Bostr.6758s0015 Boechera stricta Bostr.6758s0015 I 0.812
Gorai.006G025700 Gossypium raimondii Gorai.006G025700 I 0.812
mgf006734m Mimulus guttatus mgf006734m I 0.812
Sb10g025590 Sorghum bicolor Sb10g025590 I 0.812
GLYMA14G11960 Glycine max GLYMA14G11960 I 0.812
GSMUA_Achr7G19340_001 Musa acuminata GSMUA_Achr7G19340_001 I 0.812
MTR_3g106060 Medicago truncatula MTR_3g106060 I 0.812
F775_22247 Aegilops tauschii F775_22247 I 0.812
Traes_6DS_8F684013D Triticum aestivum Traes_6DS_8F684013D I 0.811
Bo6g080740 Brassica oleracea Bo6g080740 I 0.811
Cucsa.162810 Cucumis sativus Cucsa.162810 I 0.811
Gorai.001G037800 Gossypium raimondii Gorai.001G037800 I 0.811
GSMUA_Achr3G13440_001 Musa acuminata GSMUA_Achr3G13440_001 I 0.811
POPTR_0018s02470 Populus trichocarpa POPTR_0018s02470 I 0.811
WRKY40 Arabidopsis lyrata fgenesh2_kg.2__2291__AT1G80840.1 I 0.810
GLYMA13G44730 Glycine max GLYMA13G44730 I 0.810
Gorai.001G037700 Gossypium raimondii Gorai.001G037700 I 0.810
PRUPE_ppa009939mg Prunus persica PRUPE_ppa009939mg I 0.810
BRADI3G57710 Brachypodium distachyon BRADI3G57710 I 0.810
Bra035148 Brassica rapa Bra035148 I 0.810
GLYMA15G00570 Glycine max GLYMA15G00570 I 0.810
Bostr.20129s0425 Boechera stricta Bostr.20129s0425 I 0.810
GSMUA_Achr3G20290_001 Musa acuminata GSMUA_Achr3G20290_001 I 0.810
GRMZM2G169149 Zea mays GRMZM2G169149 I 0.810
OMERI02G32400 Oryza meridionalis OMERI02G32400 I 0.810
Ciclev10026105m.g Citrus clementina Ciclev10026105m.g I 0.810
Carubv10020726m.g Capsella rubella Carubv10020726m.g I 0.810
Bra008435 Brassica rapa Bra008435 I 0.810
Bra003588 Brassica rapa Bra003588 I 0.810
WRKY10 Arabidopsis thaliana AT1G55600 I 0.810
SapurV1A.0280s0370 Salix purpurea SapurV1A.0280s0370 I 0.810
Thhalv10018925m.g Eutrema salsugineum Thhalv10018925m.g I 0.810
PK08451.1 Cannabis sativa PK08451.1 I 0.810
PDK_20s1878521g002 Phoenix dactylifera PDK_20s1878521g002 I 0.810
ONIVA02G36110 Oryza nivara ONIVA02G36110 I 0.810
WRKY40 Arabidopsis thaliana AT1G80840 D 0.810
Pavir.J01311 Panicum virgatum Pavir.J01311 I 0.810
POPTR_0001s03620 Populus trichocarpa POPTR_0001s03620 I 0.810
Bo6g124190 Brassica oleracea Bo6g124190 I 0.810
Bo2g095640 Brassica oleracea Bo2g095640 I 0.810
Bo1g158770 Brassica oleracea Bo1g158770 I 0.810
BGIOSGA009118 Oryza indica BGIOSGA009118 I 0.810
Pavir.Aa00351 Panicum virgatum Pavir.Aa00351 I 0.810
Cucsa.271570 Cucumis sativus Cucsa.271570 I 0.810
Cagra.1725s0057 Capsella grandiflora Cagra.1725s0057 I 0.810
VIT_04s0008g05760 Vitis vinifera VIT_04s0008g05760 I 0.810
Sb04g034440 Sorghum bicolor Sb04g034440 I 0.810
WRKY40 Vitis vinifera VIT_09s0018g00240 I 0.810
LPERR01G05270 Leersia perrieri LPERR01G05270 I 0.810
OS02G0770500 Oryza sativa OS02G0770500 I 0.810
OB02G40910 Oryza brachyantha OB02G40910 I 0.810
OBART02G34040 Oryza barthii OBART02G34040 I 0.810
Si016791m.g Setaria italica Si016791m.g I 0.810
ORGLA02G0294600 Oryza glaberrima ORGLA02G0294600 I 0.810
OPUNC02G31440 Oryza punctata OPUNC02G31440 I 0.810
OGLUM02G35200 Oryza glumaepatula OGLUM02G35200 I 0.810
Solyc03g116890.2 Solanum lycopersicum Solyc03g116890.2 I 0.810
Cla021335 Citrullus lanatus Cla021335 I 0.810
LPERR02G27900 Leersia perrieri LPERR02G27900 I 0.810
43951.m000016 Ricinus communis 43951.m000016 I 0.810
cassava36924.valid.m1 Manihot esculenta cassava36924.valid.m1 I 0.810
GSMUA_Achr7G18820_001 Musa acuminata GSMUA_Achr7G18820_001 I 0.810
ORUFI02G35580 Oryza rufipogon ORUFI02G35580 I 0.810
GSMUA_Achr6G02330_001 Musa acuminata GSMUA_Achr6G02330_001 I 0.810
GSMUA_Achr7G08850_001 Musa acuminata GSMUA_Achr7G08850_001 I 0.810
PGSC0003DMG400019824 Solanum tuberosum PGSC0003DMG400019824 I 0.809
Pavir.Ea01595 Panicum virgatum Pavir.Ea01595 I 0.809
PK20163.1 Cannabis sativa PK20163.1 I 0.809
Pavir.Eb02399 Panicum virgatum Pavir.Eb02399 I 0.809
Pavir.Bb02124 Panicum virgatum Pavir.Bb02124 I 0.809
Pavir.Bb02115 Panicum virgatum Pavir.Bb02115 I 0.809
cassava37361.valid.m1 Manihot esculenta cassava37361.valid.m1 I 0.809
SapurV1A.0372s0170 Salix purpurea SapurV1A.0372s0170 I 0.809
SapurV1A.0869s0100 Salix purpurea SapurV1A.0869s0100 I 0.809
Sb02g024760 Sorghum bicolor Sb02g024760 I 0.809
Pavir.Ba01850 Panicum virgatum Pavir.Ba01850 I 0.809
WRKY72 Arabidopsis thaliana AT5G15130 I 0.809
Si030794m.g Setaria italica Si030794m.g I 0.809
Si002295m.g Setaria italica Si002295m.g I 0.809
Bo2g057610 Brassica oleracea Bo2g057610 I 0.809
GRMZM2G057011 Zea mays GRMZM2G057011 I 0.809
POPTR_0018s02480 Populus trichocarpa POPTR_0018s02480 I 0.809
evm.TU.supercontig_127.25 Carica papaya evm.TU.supercontig_127.25 I 0.809
GLYMA04G06495 Glycine max GLYMA04G06495 I 0.809
Cla008481 Citrullus lanatus Cla008481 I 0.809
GLYMA06G06530 Glycine max GLYMA06G06530 I 0.809
GRMZM2G125653 Zea mays GRMZM2G125653 I 0.809
WRKY72 Arabidopsis lyrata scaffold_601540.1 I 0.809
GSMUA_Achr7G05200_001 Musa acuminata GSMUA_Achr7G05200_001 I 0.809
TCM_018403 Theobroma cacao TCM_018403 I 0.809
mgf010377m Mimulus guttatus mgf010377m I 0.809
Traes_6AS_DA75BB1FD Triticum aestivum Traes_6AS_DA75BB1FD I 0.809
MLOC_60890 Hordeum vulgare MLOC_60890 I 0.809
Cucsa.097890 Cucumis sativus Cucsa.097890 I 0.809
chr5.CM0040.670.nd Lotus japonicus chr5.CM0040.670.nd I 0.808
Sb03g026280 Sorghum bicolor Sb03g026280 I 0.808
GSMUA_Achr5G09730_001 Musa acuminata GSMUA_Achr5G09730_001 I 0.808
MTR_1g013760 Medicago truncatula MTR_1g013760 I 0.808