CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s13009494g002
(
Phoenix dactylifera
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
PDK_20s13009494g002
T357179_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q40090_IPOBA
M11466_2.00
Ipomoea batatas
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SPF1_Q2
0.811
0.716
WRKY3
M07381_2.00
Arabidopsis thaliana
MAWAGTCAAMR
YKTTGACTWTK
Dap-seq
OMalley et al.(2016)
WRKY3_col_a
0.808
0.716
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s13009494g002
WRKY
85
141
SDGYNWRKYGQKQVKSSDSFRSYYKCTNTNCLAKKKVEHCPDGRIVEIIYRGQHNHD
PDK_20s13009494g002
WRKY
256
279
SDGYRWRKYGQKIVKGNPNPRYVV
Links
Other
WRKY
family TFs
Other
Phoenix dactylifera
TFs
165 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy