CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PDK_20s1535141g002
(
Phoenix dactylifera
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
PDK_20s1535141g002
T357215_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY30
M02563_2.00
Arabidopsis thaliana
RGTCAACNNN
NNNGTTGACY
PBM
Weirauch et al.(2014)
pTH7611
0.847
0.698
WRKY30
M07422_2.00
Arabidopsis thaliana
DAAGTCAACGN
NCGTTGACTTH
Dap-seq
OMalley et al.(2016)
WRKY30_col_a
0.847
0.698
WRKY30
M07423_2.00
Arabidopsis thaliana
NNAAGTCAACGNH
DNCGTTGACTTNN
Dap-seq
OMalley et al.(2016)
WRKY30_colamp_a
0.847
0.698
WRKY53
M01090_2.00
Arabidopsis thaliana
RGTCAACNN
NNGTTGACY
PBM
Sullivan et al.(2014)
pTH8245
0.842
0.698
WRKY55
M07392_2.00
Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD
Dap-seq
OMalley et al.(2016)
WRKY55_col_a
0.821
0.623
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1535141g002
WRKY
66
120
GEYGQKDILGAQHPRGYYRCTYRKSQGCLAMKQVQRSDEDPTIFDITYRGTHTCL
Links
Other
WRKY
family TFs
Other
Phoenix dactylifera
TFs
433 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy