CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CIMG_09809
(
Coccidioides immitis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
CIMG_09809
T357370_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_04109
M02576_2.00
Fusarium graminearum
NNNCGGNNNN
NNNNCCGNNN
PBM
Weirauch et al.(2014)
pTH8226
0.545
0.775
NCU00445
M02586_2.00
Neurospora crassa
NNCGGNNNNN
NNNNNCCGNN
PBM
Weirauch et al.(2014)
pTH8914
0.537
0.750
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_09809T0
Zinc cluster
23
68
QACIPCRERRVRCDLGSVDHPHQGPCGRCRRERKFCHFSATRGKKK
Links
Other
Zinc cluster
family TFs
Other
Coccidioides immitis
TFs
94 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy