CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CPAG_00982
(
Candida parapsilosis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
CPAG_00982
T357465_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CAT8
M00102_2.00
Saccharomyces cerevisiae
NNNCCGGAN
NTCCGGNNN
PBM
Badis et al.(2008)
CAT8_4532
0.578
0.579
CAT8
M07529_2.00
Saccharomyces cerevisiae
CCGGRN
NYCCGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0280.1
0.578
0.579
CAT8
M08688_2.00
Saccharomyces cerevisiae
NCGGNNNDVNGGNN
NNCCNBHNNNCCGN
Misc
DeBoer et al.(2011)
YMR280C_33
0.578
0.579
CAT8
M11485_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CAT8_Q6_01
0.578
0.579
CAT8
M11486_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CAT8_Q6
0.578
0.579
acu-15
M02616_2.00
Neurospora crassa
NNCGGVNNNN
NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH7801
0.573
0.526
acu-15
M02617_2.00
Neurospora crassa
NNCGGVNNNN
NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH8900
0.573
0.526
ANIA_00689
M11469_2.00
Aspergillus nidulans
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$FACBALL_Q2
0.573
0.526
ANIA_00689
M11470_2.00
Aspergillus nidulans
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$FACBCA_Q2
0.573
0.526
ANIA_00689
M11471_2.00
Aspergillus nidulans
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$FACBCB_Q2
0.573
0.526
FGRRES_09921
M02577_2.00
Fusarium graminearum
NNCGGVNNNN
NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH7794
0.573
0.500
SIP4
M00089_2.00
Saccharomyces cerevisiae
NNNNNNCSGN
NCSGNNNNNN
PBM
Badis et al.(2008)
SIP4_2067
0.544
0.763
SIP4
M01582_2.00
Saccharomyces cerevisiae
NNNNNNNVVD
HBBNNNNNNN
PBM
Zhu et al.(2009)
Sip4
0.544
0.763
SIP4
M07516_2.00
Saccharomyces cerevisiae
YYCGGRR
YYCCGRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0380.1
0.544
0.763
SIP4
M08669_2.00
Saccharomyces cerevisiae
NCGGNYNVMYSGR
YCSRKBNRNCCGN
Misc
DeBoer et al.(2011)
YJL089W_2067
0.544
0.763
SIP4
M08670_2.00
Saccharomyces cerevisiae
YYCGGRR
YYCCGRR
Misc
DeBoer et al.(2011)
YJL089W_573
0.544
0.763
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPAG_00982.1
Zinc cluster
28
66
QACDRCRIKKIKCDGLSPCQNCKKADLECKTSDKLTRRA
Links
Other
Zinc cluster
family TFs
Other
Candida parapsilosis
TFs
248 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy