CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_00044
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_00044
T357927_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01243
M02588_2.00
Neurospora crassa
NNNSCGN
NCGSNNN
PBM
Weirauch et al.(2014)
pTH8917
0.638
0.947
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_00044T0
Zinc cluster
344
384
ARCQRCRKSKKGCDRQRPCGRCKDAGLSADQCISEDEGNGR
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
85 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_00044
Verticillium alfalfae
VDBG_00044
I
0.683
VDAG_08332
Verticillium dahliae
VDAG_08332
I
0.638
NEUTE1DRAFT_57664
Neurospora tetrasperma
NEUTE1DRAFT_57664
I
0.638
PODANS_2_3270
Podospora anserina
PODANS_2_3270
I
0.638
SMAC_03943
Sordaria macrospora
SMAC_03943
I
0.638
NCU01243
Neurospora crassa
NCU01243
D
0.638
estExt_Genewise1Plus.C_11214
Neurospora discreta
estExt_Genewise1Plus.C_11214
I
0.638
GMDG_05406
Pseudogymnoascus destructans
GMDG_05406
I
0.622
MBM_03820
Marssonina brunnea
MBM_03820
I
0.622
BGHDH14_bgh04283
Blumeria graminis
BGHDH14_bgh04283
I
0.622
OIDMADRAFT_115449
Oidiodendron maius
OIDMADRAFT_115449
I
0.622
V499_03435
Pseudogymnoascus pannorum
V499_03435
I
0.622
PFICI_07655
Pestalotiopsis fici
PFICI_07655
I
0.614
NechaG105273
Fusarium solani
NechaG105273
I
0.614
MANI_005306
Metarhizium anisopliae
MANI_005306
I
0.614
MAC_00493
Metarhizium acridum
MAC_00493
I
0.614
MAJ_02006
Metarhizium majus
MAJ_02006
I
0.614
MAM_07504
Metarhizium album
MAM_07504
I
0.614
MGU_05868
Metarhizium guizhouense
MGU_05868
I
0.614
SAPIO_CDS10407
Scedosporium apiospermum
SAPIO_CDS10407
I
0.614
UCREL1_4926
Eutypa lata
UCREL1_4926
I
0.614
UV8b_2437
Ustilaginoidea virens
UV8b_2437
I
0.614
estExt_fgenesh1_pm.C_sca_6_chr9_2_00089
Nectria haematococca
estExt_fgenesh1_pm.C_sca_6_chr9_2_00089
I
0.614
X797_006177
Metarhizium robertsii
X797_006177
I
0.614
TRIVIDRAFT_63141
Trichoderma virens
TRIVIDRAFT_63141
I
0.614
TRIREDRAFT_23294
Trichoderma reesei
TRIREDRAFT_23294
I
0.614
S40288_01230
Stachybotrys chartarum
S40288_01230
I
0.614
VHEMI01335
Torrubiella hemipterigena
VHEMI01335
I
0.614
SBOR_5353
Sclerotinia borealis
SBOR_5353
I
0.614
TRIATDRAFT_233014
Trichoderma atroviride
TRIATDRAFT_233014
I
0.614
S40285_04268
Stachybotrys chlorohalonata
S40285_04268
I
0.614
MBR_03811
Metarhizium brunneum
MBR_03811
I
0.614
CPUR_06724
Claviceps purpurea
CPUR_06724
I
0.614
CCM_05608
Cordyceps militaris
CCM_05608
I
0.614
CTHT_0052970
Chaetomium thermophilum
CTHT_0052970
I
0.614
BBA_00830
Beauveria bassiana
BBA_00830
I
0.614
Bcin08g06020
Botrytis cinerea
Bcin08g06020
I
0.614
CGGC5_11552
Colletotrichum gloeosporioides
CGGC5_11552
I
0.614
CH063_02161
Colletotrichum higginsianum
CH063_02161
I
0.614
Cob_12019
Colletotrichum orbiculare
Cob_12019
I
0.614
F503_00618
Ophiostoma piceae uamh
F503_00618
I
0.614
CSUB01_02966
Colletotrichum sublineola
CSUB01_02966
I
0.614
FPSE_04097
Fusarium pseudograminearum
FPSE_04097
I
0.614
FVEG_08032
Fusarium verticillioides
FVEG_08032
I
0.614
FFUJ_02710
Fusarium fujikuroi
FFUJ_02710
I
0.614
FGRRES_07133
Fusarium graminearum
FGRRES_07133
I
0.614
GLRG_03269
Colletotrichum graminicola
GLRG_03269
I
0.614
H102_03959
Trichophyton rubrum
H102_03959
I
0.592
MCYG_03841
Microsporum canis
MCYG_03841
I
0.592
H105_03987
Trichophyton soudanense
H105_03987
I
0.592
TEQG_03253
Trichophyton equinum
TEQG_03253
I
0.592
TESG_04315
Trichophyton tonsurans
TESG_04315
I
0.592
H101_06083
Trichophyton interdigitale
H101_06083
I
0.592
MGYG_07809
Microsporum gypseum
MGYG_07809
I
0.592
ARB_03230
Arthroderma benhamiae
ARB_03230
I
0.592
TRV_02459
Trichophyton verrucosum
TRV_02459
I
0.592
MCYG_03841
Arthroderma otae
MCYG_03841
I
0.592
H072_1268
Dactylellina haptotyla
H072_1268
I
0.584
AOL_s00083g408
Arthrobotrys oligospora
AOL_s00083g408
I
0.584
EV44_g5594
Erysiphe necator
EV44_g5594
I
0.574
CFIO01_07548
Colletotrichum fioriniae
CFIO01_07548
I
0.566
ACRE_049560
Acremonium chrysogenum
ACRE_049560
I
0.566
PV11_02999
Exophiala sideris
PV11_02999
I
0.561
DOTSEDRAFT_122593
Dothistroma septosporum
DOTSEDRAFT_122593
I
0.561
PDIP_80460
Penicillium digitatum
PDIP_80460
I
0.561
PDE_07750
Penicillium oxalicum
PDE_07750
I
0.561
SEPMUDRAFT_60609
Sphaerulina musiva
SEPMUDRAFT_60609
I
0.561
GSTUM_00005719001
Tuber melanosporum
GSTUM_00005719001
I
0.554
AB00299.1
Alternaria brassicicola
AB00299.1
I
0.544
A1O1_02644
Capronia coronata
A1O1_02644
I
0.544
estExt_fgenesh1_pg.C_10631
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_10631
I
0.544
A1O3_05207
Capronia epimyces
A1O3_05207
I
0.544
SNOG_10444
Stagonospora nodorum
SNOG_10444
I
0.544
COCVIDRAFT_17513
Bipolaris victoriae
COCVIDRAFT_17513
I
0.544
PV10_04586
Exophiala mesophila
PV10_04586
I
0.544
PTT_08856
Pyrenophora teres
PTT_08856
I
0.544
PTRG_09915
Pyrenophora triticirepentis
PTRG_09915
I
0.544
MPH_02318
Macrophomina phaseolina
MPH_02318
I
0.544
COCSADRAFT_174784
Bipolaris sorokiniana
COCSADRAFT_174784
I
0.544
COCMIDRAFT_2306
Bipolaris oryzae
COCMIDRAFT_2306
I
0.544
SNOG_10444
Phaeosphaeria nodorum
SNOG_10444
I
0.544
COCC4DRAFT_56976
Bipolaris maydis
COCC4DRAFT_56976
I
0.544
SETTUDRAFT_102674
Setosphaeria turcica
SETTUDRAFT_102674
I
0.544
COCCADRAFT_27331
Bipolaris zeicola
COCCADRAFT_27331
I
0.544
UCRNP2_4556
Neofusicoccum parvum
UCRNP2_4556
I
0.544