VDBG_02399 (Verticillium albo atrum)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 VDBG_02399 T357960_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU08658
M02628_2.00 		Neurospora crassa
NYCGGBWAN
NTWVCCGRN		 PBM
Weirauch et al.(2014)
pTH7896 		0.572 0.472
ANIA_06846
M01390_2.00 		Aspergillus nidulans
VTCGGYTA
TARCCGAB		 PBM
Lambert et al.(2019)
pEX0258 		0.571 0.500
NCU00017
M02582_2.00 		Neurospora crassa
NDCGBNHNNN
NNNDNVCGHN		 PBM
Weirauch et al.(2014)
pTH8351 		0.544 0.667
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_02399T0 Zinc cluster 56 91

Links

Other Zinc cluster family TFs
Other Verticillium albo atrum TFs

Invalid Input OrderBy

237 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action