CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_03302
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_03302
T357980_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_03302T0
Zinc cluster
133
180
KACDFCHRRGRKCKLPSTTSPDSATTVTCLTCIEHGATCTWDRVAAKR
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_03302
Verticillium alfalfae
VDBG_03302
N
0.683
VDAG_02205
Verticillium dahliae
VDAG_02205
N
0.683
GLRG_05497
Colletotrichum graminicola
GLRG_05497
N
0.616
CFIO01_11849
Colletotrichum fioriniae
CFIO01_11849
N
0.615
CSUB01_10048
Colletotrichum sublineola
CSUB01_10048
N
0.615
Cob_00818
Colletotrichum orbiculare
Cob_00818
N
0.612
FFUJ_14215
Fusarium fujikuroi
FFUJ_14215
N
0.601
CGGC5_13067
Colletotrichum gloeosporioides
CGGC5_13067
N
0.585
PV10_06798
Exophiala mesophila
PV10_06798
N
0.568
PV11_01269
Exophiala sideris
PV11_01269
N
0.545