CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_04632
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_04632
T357998_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
adv-1
M02624_2.00
Neurospora crassa
VGCGSYWMN
NKWRSCGCB
PBM
Weirauch et al.(2014)
pTH9685
0.645
0.923
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_04632T0
Zinc cluster
32
70
TGCYTCRLRRKKCDEGTPHCTACKHLGLQCEYKRPMWWS
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy