CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_06776
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_06776
T358028_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_06776T0
Zinc cluster
11
50
TGCITCKIRRIKCDEARPACRRCVTTGRACDGYSTPSTAS
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_06776
Verticillium alfalfae
VDBG_06776
N
0.683
VDAG_05842
Verticillium dahliae
VDAG_05842
N
0.612
PFICI_11615
Pestalotiopsis fici
PFICI_11615
N
0.569
CGGC5_2317
Colletotrichum gloeosporioides
CGGC5_2317
N
0.550
AUEXF2481DRAFT_37416
Aureobasidium subglaciale
AUEXF2481DRAFT_37416
N
0.548