VDBG_08512 (Verticillium albo atrum)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 VDBG_08512 T358049_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
qa-1F
M11489_2.00 		Neurospora crassa
HHGGNTAADBVYTYAWCCBB
VVGGWTRARBVHTTANCCDD		 Transfac
Matys et al.(2006)
F$QA1F_01 		0.643 0.744
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_08512T0 Zinc cluster 28 68

Links

Other Zinc cluster family TFs
Other Verticillium albo atrum TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VDBG_08512 Verticillium alfalfae VDBG_08512 I 0.683
VDAG_08177 Verticillium dahliae VDAG_08177 I 0.683
NEUTE1DRAFT_147986 Neurospora tetrasperma NEUTE1DRAFT_147986 I 0.643
SMAC_07407 Sordaria macrospora SMAC_07407 I 0.643
GGTG_00383 Gaeumannomyces graminis GGTG_00383 I 0.643
qa-1F Neurospora crassa NCU06028 D 0.643
MAPG_07478 Magnaporthe poae MAPG_07478 I 0.643
GLRG_07125 Colletotrichum graminicola GLRG_07125 I 0.636
PODANS_5_5100 Podospora anserina PODANS_5_5100 I 0.629
W97_04550 Coniosporium apollinis W97_04550 I 0.621
estExt_Genewise1.C_80993 Neurospora discreta estExt_Genewise1.C_80993 I 0.620
UCRNP2_4108 Neofusicoccum parvum UCRNP2_4108 I 0.619
MPH_01982 Macrophomina phaseolina MPH_01982 I 0.619
F503_06755 Ophiostoma piceae uamh F503_06755 I 0.617
SPBR_06572 Sporothrix brasiliensis SPBR_06572 I 0.617
MGG_07777 Magnaporthe oryzae MGG_07777 I 0.610
MYCTH_2067244 Myceliophthora thermophila MYCTH_2067244 I 0.604
THITE_2116895 Thielavia terrestris THITE_2116895 I 0.602
PFICI_15081 Pestalotiopsis fici PFICI_15081 I 0.594
PVAR5_3766 Byssochlamys spectabilis PVAR5_3766 I 0.586
COCVIDRAFT_27956 Bipolaris victoriae COCVIDRAFT_27956 I 0.584
fgenesh1_pg.C_scaffold_40000014 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_40000014 I 0.584
estExt_Genewise1Plus.C_50594 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_50594 I 0.584
SETTUDRAFT_140992 Setosphaeria turcica SETTUDRAFT_140992 I 0.584
PTT_06800 Pyrenophora teres PTT_06800 I 0.584
COCCADRAFT_5667 Bipolaris zeicola COCCADRAFT_5667 I 0.584
LEMA_P062270.1 Leptosphaeria maculans LEMA_P062270.1 I 0.584
MYCFIDRAFT_170117 Pseudocercospora fijiensis MYCFIDRAFT_170117 I 0.584
PV09_01109 Verruconis gallopava PV09_01109 I 0.571
estExt_fgenesh1_pg.C_40955 Cryphonectria parasitica estExt_fgenesh1_pg.C_40955 I 0.570
PV06_01512 Exophiala oligosperma PV06_01512 N 0.555
GLOTRDRAFT_78347 Gloeophyllum trabeum GLOTRDRAFT_78347 N 0.554
EURHEDRAFT_497889 Aspergillus ruber EURHEDRAFT_497889 I 0.545
HMPREF1624_07664 Sporothrix schenckii HMPREF1624_07664 I 0.544