CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AACERI_AaceriAFL033W
(
Saccharomycetaceae sp ashbya aceri
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
AACERI_AaceriAFL033W
T359167_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
THI2
M08647_2.00
Saccharomyces cerevisiae
NMNKNNNBNNBBNNNNCCGH
DCGGNNNNVVNNVNNNMNKN
Misc
DeBoer et al.(2011)
YBR240C_1449
0.584
0.789
THI2
M08467_2.00
Saccharomyces cerevisiae
GGMAACYSWWAGARC
GYTCTWWSRGTTKCC
COMPILED
Mathelier et al.(2014)
MA0407.1
0.584
0.789
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGO13123
Zinc cluster
25
62
TGCWACRFKKRRCDEGVPFCALCLKHGDTCSYDVRLVW
Links
Other
Zinc cluster
family TFs
Other
Saccharomycetaceae sp ashbya aceri
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy