AGOS_AAL057C (Ashbya gossypii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 AGOS_AAL057C T359396_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RSC3
M00082_2.00
Saccharomyces cerevisiae
GCGCGCGG

CCGCGCGC
PBM
Badis et al.(2008)
RSC3_2035
0.584 0.784
RSC3
M01576_2.00
Saccharomyces cerevisiae
NNNNNSCGNN

NNCGSNNNNN
PBM
Zhu et al.(2009)
Rsc3
0.584 0.784
RSC3
M07509_2.00
Saccharomyces cerevisiae
NNVCGCG

CGCGBNN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0374.1
0.584 0.784
RSC3
M08655_2.00
Saccharomyces cerevisiae
NNVCGCG

CGCGBNN
Misc
DeBoer et al.(2011)
YDR303C_580
0.584 0.784
RSC30
M00086_2.00
Saccharomyces cerevisiae
NGCGCGCGSN

NSCGCGCGCN
PBM
Badis et al.(2008)
RSC30_2087
0.539 0.811
RSC30
M01580_2.00
Saccharomyces cerevisiae
NNDCGSVNN

NNBSCGHNN
PBM
Zhu et al.(2009)
Rsc30
0.539 0.811
RSC30
M07513_2.00
Saccharomyces cerevisiae
VSCGCGCS

SGCGCGSB
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0375.1
0.539 0.811
RSC30
M08663_2.00
Saccharomyces cerevisiae
HNHVHCSCGCGCGSGNDVSVN

NBSBHNCSCGCGCGSGDBDND
Misc
DeBoer et al.(2011)
YHR056C_857
0.539 0.811
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAS50309 Zinc cluster 14 51

Links

Other Zinc cluster family TFs
Other Ashbya gossypii TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AACERI_AaceriAAL057C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL057C I 0.683
Ecym_3200 Eremothecium cymbalariae Ecym_3200 I 0.651
SAKL0G09768g Lachancea kluyveri SAKL0G09768g I 0.637
TPHA_0E01290 Tetrapisispora phaffii TPHA_0E01290 I 0.586
Kpol_1023p41 Vanderwaltozyma polyspora Kpol_1023p41 I 0.586
KAFR_0E01300 Kazachstania africana KAFR_0E01300 I 0.584
4894_YDR303C Saccharomyces bayanus 4894_YDR303C I 0.584
RSC3 Saccharomyces cerevisiae YDR303C D 0.584
Scas_Contig588.11 Saccharomyces castellii Scas_Contig588.11 I 0.584
SU7_2665 Saccharomyces arboricola SU7_2665 I 0.584
4855_Multiple Saccharomyces paradoxus 4855_Multiple I 0.584
Kpol_1005p2 Vanderwaltozyma polyspora Kpol_1005p2 I 0.584
NDAI_0C04170 Naumovozyma dairenensis NDAI_0C04170 I 0.584
NCAS_0F02700 Naumovozyma castellii NCAS_0F02700 I 0.584
SKUD_196709 Saccharomyces kudriavzevii SKUD_196709 I 0.584
ZYRO0C13882g Zygosaccharomyces rouxii ZYRO0C13882g I 0.567
ZBAI_09770 Zygosaccharomyces bailii ZBAI_09770 I 0.567
ZBAI_03963 Zygosaccharomyces bailii ZBAI_03963 I 0.567
CAGL0D03850g Candida glabrata CAGL0D03850g N 0.559
TBLA_0C03390 Tetrapisispora blattae TBLA_0C03390 I 0.555
TDEL_0E03050 Torulaspora delbrueckii TDEL_0E03050 I 0.546
SU7_1441 Saccharomyces arboricola SU7_1441 I 0.539
9825_Multiple Saccharomyces mikatae 9825_Multiple I 0.539
RSC30 Saccharomyces cerevisiae YHR056C D 0.539
10181_Multiple Saccharomyces paradoxus 10181_Multiple I 0.539
10337_Multiple Saccharomyces bayanus 10337_Multiple I 0.539