AGOS_AGL083W (Ashbya gossypii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 AGOS_AGL083W T359430_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RGT1
M00092_2.00
Saccharomyces cerevisiae
CGGRDNWWHN

NDWWNHYCCG
PBM
Badis et al.(2008)
RGT1_2131
0.595 0.675
RGT1
M01585_2.00
Saccharomyces cerevisiae
HCGGADNWWN

NWWNHTCCGD
PBM
Zhu et al.(2009)
Rgt1
0.595 0.675
RGT1
M07518_2.00
Saccharomyces cerevisiae
NCGGADNAWHN

NDWTNHTCCGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0367.1
0.595 0.675
RGT1
M08673_2.00
Saccharomyces cerevisiae
NDNNNYCGGAWWAAYHNNNN

NNNNDRTTWWTCCGRNNNHN
Misc
DeBoer et al.(2011)
YKL038W_803
0.595 0.675
RGT1
M11480_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RGT1_Q5
0.595 0.675
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAS54407 Zinc cluster 44 85

Links

Other Zinc cluster family TFs
Other Ashbya gossypii TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ecym_7239 Eremothecium cymbalariae Ecym_7239 I 0.604
KNAG_0A07100 Kazachstania naganishii KNAG_0A07100 I 0.579
SAKL0A09856g Lachancea kluyveri SAKL0A09856g I 0.555
SU7_2014 Saccharomyces arboricola SU7_2014 I 0.595
666_YBR033W Saccharomyces bayanus 666_YBR033W N 0.566
14629_YKL038W Saccharomyces bayanus 14629_YKL038W I 0.595
RGT1 Saccharomyces cerevisiae YKL038W D 0.595
13522_YKL038W Saccharomyces mikatae 13522_YKL038W I 0.579
13626_YKL038W Saccharomyces paradoxus 13626_YKL038W I 0.595
AACERI_AaceriAGL083W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL083W I 0.683
TPHA_0C04280 Tetrapisispora phaffii TPHA_0C04280 I 0.566
TDEL_0B06360 Torulaspora delbrueckii TDEL_0B06360 I 0.538
Kpol_1002p5 Vanderwaltozyma polyspora Kpol_1002p5 I 0.595
ZBAI_08469 Zygosaccharomyces bailii ZBAI_08469 I 0.564
ZBAI_03469 Zygosaccharomyces bailii ZBAI_03469 I 0.564
ZYRO0E05676g Zygosaccharomyces rouxii ZYRO0E05676g I 0.588