CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AGOS_AGR280C
(
Ashbya gossypii
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
AGOS_AGR280C
T359437_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
YLR278C
M00099_2.00
Saccharomyces cerevisiae
NNNCGGVVNN
NNBBCCGNNN
PBM
Badis et al.(2008)
YLR278C_2147
0.545
0.703
YLR278C
M00926_2.00
Saccharomyces cerevisiae
NBCGGAGTTN
NAACTCCGVN
PBM
Gordan et al.(2011)
Ylr278c
0.545
0.703
YLR278C
M07525_2.00
Saccharomyces cerevisiae
NCGGAGWW
WWCTCCGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0430.1
0.545
0.703
YLR278C
M08683_2.00
Saccharomyces cerevisiae
NCGGAGWW
WWCTCCGN
Misc
DeBoer et al.(2011)
YLR278C_589
0.545
0.703
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAS54770
Zinc cluster
39
75
RSCLLCQRRKQRCDHKIPSCTACLKAGVRCIQPAKYG
Links
Other
Zinc cluster
family TFs
Other
Ashbya gossypii
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AACERI_AaceriAGR280C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAGR280C
I
0.683
Ecym_3112
Eremothecium cymbalariae
Ecym_3112
I
0.669
Kpol_345p3
Vanderwaltozyma polyspora
Kpol_345p3
I
0.647
ZBAI_03663
Zygosaccharomyces bailii
ZBAI_03663
I
0.618
ZBAI_09347
Zygosaccharomyces bailii
ZBAI_09347
I
0.618
KLTH0G15180g
Kluyveromyces thermotolerans
KLTH0G15180g
I
0.617
KLTH0G15180g
Lachancea thermotolerans
KLTH0G15180g
I
0.617
ZYRO0D14432g
Zygosaccharomyces rouxii
ZYRO0D14432g
I
0.577
TPHA_0F02630
Tetrapisispora phaffii
TPHA_0F02630
I
0.573
LALA0_S10e04918g
Lachancea lanzarotensis
LALA0_S10e04918g
I
0.573
KNAG_0F03040
Kazachstania naganishii
KNAG_0F03040
I
0.570
KNAG_0M00970
Kazachstania naganishii
KNAG_0M00970
I
0.570
BN7_1291
Wickerhamomyces ciferrii
BN7_1291
N
0.569
SAKL0A08074g
Lachancea kluyveri
SAKL0A08074g
I
0.563
TDEL_0G03970
Torulaspora delbrueckii
TDEL_0G03970
N
0.563
KLLA0_C04620g
Kluyveromyces lactis
KLLA0_C04620g
N
0.556
NDAI_0D02730
Naumovozyma dairenensis
NDAI_0D02730
I
0.547
CAGL0G09757g
Candida glabrata
CAGL0G09757g
I
0.547
16783_Multiple
Saccharomyces bayanus
16783_Multiple
I
0.545
15796_YLR278C
Saccharomyces paradoxus
15796_YLR278C
I
0.545
23508_YLR278C
Saccharomyces mikatae
23508_YLR278C
I
0.545
SU7_2306
Saccharomyces arboricola
SU7_2306
I
0.545
KAFR_0A04940
Kazachstania africana
KAFR_0A04940
I
0.545
NCAS_0F00370
Naumovozyma castellii
NCAS_0F00370
I
0.545
TBLA_0E01110
Tetrapisispora blattae
TBLA_0E01110
I
0.545
YLR278C
Saccharomyces cerevisiae
YLR278C
D
0.545
Scas_Contig526.3
Saccharomyces castellii
Scas_Contig526.3
I
0.545