CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CH063_01030
(
Colletotrichum higginsianum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CH063_01030
T363749_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05411
M02611_2.00
Neurospora crassa
NNNYCCGGRHNNN
NNNDYCCGGRNNN
PBM
Weirauch et al.(2014)
pTH9700
0.552
0.775
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF33774
Zinc cluster
33
72
AACLTCRKRKTRCAGERPVCSTCSKNGHTCLGYNEVIEKK
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum higginsianum
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy